Tc02v2_t026290.1

Overview
NameTc02v2_t026290.1
Unique NameTc02v2_t026290.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length843
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productanthranilate synthase beta subunit 1, chloroplastic
NoteAnthranilate synthase beta subunit 1, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610003
GenbankXM_007045410.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g026290Tc02v2_g026290Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p026290.1Tc02v2_p026290.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto129455auto129455Theobroma cacaoexon
exon-auto129456auto129456Theobroma cacaoexon
exon-auto129457auto129457Theobroma cacaoexon
exon-auto129458auto129458Theobroma cacaoexon
exon-auto129459auto129459Theobroma cacaoexon
exon-auto129460auto129460Theobroma cacaoexon
exon-auto129461auto129461Theobroma cacaoexon
exon-auto129462auto129462Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto129463auto129463Theobroma cacaoCDS
CDS-auto129464auto129464Theobroma cacaoCDS
CDS-auto129465auto129465Theobroma cacaoCDS
CDS-auto129466auto129466Theobroma cacaoCDS
CDS-auto129467auto129467Theobroma cacaoCDS
CDS-auto129468auto129468Theobroma cacaoCDS
CDS-auto129469auto129469Theobroma cacaoCDS
CDS-auto129470auto129470Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t026290.1 ID=Tc02v2_t026290.1|Name=Tc02v2_t026290.1|organism=Theobroma cacao|type=mRNA|length=843bp
ATGGATGCTACTGTTATAATGCGTTCATCTCTGGTTCAACCAAAACCTTC
ACTCTCTGCTAAAACCCTTCAAAACCCATCTCTGTCTCGCCTATCCAGGC
TCTCTGCTCCATCAAGGATTGGATTTATGGCAAAAAAGAGAACTGGGATT
GTTGGAAAAGCATCATTGTCATCGGCTGTATCGGACTCAAGCGCTTCACT
TTTAGAGAATAAGAAAAACAACAGGAATCCTATTGTCGTCATTGACAATT
ACGATAGTTTCACTTACAATCTTTGCCAGTATTTGGGAGAGCTTGGATGT
TACTTTGAGGTTTATCGAAATGATGAGTTAGCTGTAGAAGAGCTGAAAAG
GAAAAACCCTAGGGGAGTGCTTATCTCCCCTGGTCCAGGCACACCCCAAG
ATTCTGGAATATCATTGCAAACAGTTTTGGAGCTTGGACCTACTGTACCT
TTGTTTGGTGTTTGCATGGGTTTGCAGTGCATTGGCGAGGCTTTTGGAGG
AAAGATAGTGCGTTCTCCCTATGGTGTTATGCATGGCAAAAGTTCTCTTG
TTTATTATGATGAGAAGGGGGAAGATGGGTTGTTCACTGGATTGTCAAAC
CCTTTCAATGCTGGCCGATATCACAGCCTCGTGATTGAAAAGGACAGTTT
TCCCGGGGAAGAGCTCGAGGTTACTGCATGGACAGAAGATGGACTGATAA
TGGCTGCTCGGCACAAAGTATATAAGCATCTACAGGGTGTTCAGTTCCAT
CCAGAGAGCATCATAACCTCTGAAGGCAAGACTATTGTTCGCAATTTCAT
CAAACTGATAGAGAAAAAGGAGGCGGCTGAATCCCAGAATTAA
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protein sequence of Tc02v2_p026290.1

>Tc02v2_p026290.1 ID=Tc02v2_p026290.1|Name=Tc02v2_p026290.1|organism=Theobroma cacao|type=polypeptide|length=281bp
MDATVIMRSSLVQPKPSLSAKTLQNPSLSRLSRLSAPSRIGFMAKKRTGI
VGKASLSSAVSDSSASLLENKKNNRNPIVVIDNYDSFTYNLCQYLGELGC
YFEVYRNDELAVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVP
LFGVCMGLQCIGEAFGGKIVRSPYGVMHGKSSLVYYDEKGEDGLFTGLSN
PFNAGRYHSLVIEKDSFPGEELEVTAWTEDGLIMAARHKVYKHLQGVQFH
PESIITSEGKTIVRNFIKLIEKKEAAESQN*
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