Tc02v2_t026040.1

Overview
NameTc02v2_t026040.1
Unique NameTc02v2_t026040.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length957
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 34 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
ProductD-galacturonate reductase
NoteD-galacturonate reductase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18609970
GenbankXM_007045354.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g026040Tc02v2_g026040Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p026040.1Tc02v2_p026040.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto128928auto128928Theobroma cacaoexon
exon-auto128929auto128929Theobroma cacaoexon
exon-auto128930auto128930Theobroma cacaoexon
exon-auto128931auto128931Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto128932auto128932Theobroma cacaoCDS
CDS-auto128933auto128933Theobroma cacaoCDS
CDS-auto128934auto128934Theobroma cacaoCDS
CDS-auto128935auto128935Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t026040.1 ID=Tc02v2_t026040.1|Name=Tc02v2_t026040.1|organism=Theobroma cacao|type=mRNA|length=957bp
ATGGCAGTAGTAGTACCTGAAGTCACTCTAAGCTCTAGTGACGGCCTAGC
TATTCCAGTGATCGGCATGGGAACCATGTCAAGCCCTCCGGTTGGTCCAG
AAATCACCAAGGATGCAATCATCGAAGCAATCATGGCAGGCTACCGCCAC
TTCGACACCGCGTTTGTGTACCGGACGGAGCAGCCTCTAGGAGAAGCAAT
TGCCGAGGCCCTGCGTCTTGGGCTTGTAAAGTCTAGAGATGAACTCTATA
TTAGCTCCAAGCTATGGTGCAGCTTTGGTGAGAAGGGCCTTATCCTGCCT
GCAATCAATATGAGCCTTAGGAATCTTCAATTGGACTATCTTGATATGTA
CCTCATCCATTGGCCATTGAAATTGAGTGAAGAGGTACGTCAAATGCCAG
CCAAAAAGGAACATATATCTCCCTTAGATATCAAGTCAGTCTGGGAAGCA
ATGGAAGAATGCAAGAGCCTCGGCCTAACCAAGGGCATTGGAGTAAGCAA
TTTCACTTGTAAGCAGCTTGAGGAGCTCTTGTCCACTGCCAAAATTCCTC
CAGCTGTTAATCAAGTGGAGATGAACCCACTTTGGCAGCAAAAGAAATTG
AGGGAGTTTTGCAAGGCAAGGGGTATTCAGGTCACAGCATACTCACCATT
GGGTGCATTCAATACTAAATGGGGAGACAACAGAATTTTGGAGTGTTATG
TGCTTGAAGAAATTGCAAAGGCTAAAGGAAAAACCACTGCTCAGATATCT
CTGAGATGGCTCTATGAGCAAGAAGTGAGCTCAGTAGCAAAAAGCTTCAA
CAAGGAGAGAATGAAACAGAACCTTGACATCTTTGACTGGTCCTTAACTG
AAGAGGAGTCCAACAAGATAAGCCAGCTTCCTCAACGCAAAGGAATTACA
TTTGCATCTATTTTTGGACCTCATGATTGGCTGCTTCAGCTTGATGCTGA
GGATTGA
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protein sequence of Tc02v2_p026040.1

>Tc02v2_p026040.1 ID=Tc02v2_p026040.1|Name=Tc02v2_p026040.1|organism=Theobroma cacao|type=polypeptide|length=319bp
MAVVVPEVTLSSSDGLAIPVIGMGTMSSPPVGPEITKDAIIEAIMAGYRH
FDTAFVYRTEQPLGEAIAEALRLGLVKSRDELYISSKLWCSFGEKGLILP
AINMSLRNLQLDYLDMYLIHWPLKLSEEVRQMPAKKEHISPLDIKSVWEA
MEECKSLGLTKGIGVSNFTCKQLEELLSTAKIPPAVNQVEMNPLWQQKKL
REFCKARGIQVTAYSPLGAFNTKWGDNRILECYVLEEIAKAKGKTTAQIS
LRWLYEQEVSSVAKSFNKERMKQNLDIFDWSLTEEESNKISQLPQRKGIT
FASIFGPHDWLLQLDAED*
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