Tc02v2_t025740.1

Overview
NameTc02v2_t025740.1
Unique NameTc02v2_t025740.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length993
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 122 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
Productlignin-forming anionic peroxidase
NoteLignin-forming anionic peroxidase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18609928
GenbankXM_018114502.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g025740Tc02v2_g025740Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p025740.1Tc02v2_p025740.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto128320auto128320Theobroma cacaoexon
exon-auto128321auto128321Theobroma cacaoexon
exon-auto128322auto128322Theobroma cacaoexon
exon-auto128323auto128323Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto128324auto128324Theobroma cacaoCDS
CDS-auto128325auto128325Theobroma cacaoCDS
CDS-auto128326auto128326Theobroma cacaoCDS
CDS-auto128327auto128327Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t025740.1 ID=Tc02v2_t025740.1|Name=Tc02v2_t025740.1|organism=Theobroma cacao|type=mRNA|length=993bp
ATGCTAATAGCTGTTGGAAATTTTTTGTCACTCGTAGCAAGGAGAGCTGC
TGTTGTGGTGATCCTGTTGCTTTTGATGAGCGACTGCCAATGCCGAGCAC
AACTTTCCTCTACATTTTATGACAAGACATGCCCAAATGCACTTAGGACC
ATTCGCACAGCCATCAGAACCGCTATTGCACGAGAGCGTAGAATGGCTGC
TTCTCTAATTCGCCTTCATTTCCATGACTGCTTTGTTCAGGGATGTGATG
CCTCAATCTTACTAGACGATGCCTCCTCAATCACAAGCGAAAAGAATGCA
CTCCAAAATAAAGACTCTGCAAGAGGTTATGAAGTCATTGACAAGGCAAA
ATCTGATGTGGAACACATTTGTCCTGGGGTTGTATCTTGTGCAGATATCC
TTGCAGTTGCAGCCAGGGATGCCTCAGAATACGTGGGTGGCCCATCTTGG
AGAGTGAAGCTTGGGAGAAGAGATTCTACCACTGCTAGCGTTAGTCTGGC
AACCAGTCAACTTCCTCGTTTCACAGCCAGCCTTGAAAGCCTAATCGATC
TCTTTAGGAGCAAGGGCCTTAGTGCAAGAGACATGGTTGCTCTGTCAGGT
TCCCATACCATTGGACAAGCTCAATGCGTTACATTTCGGAACAGGATATA
CAACAATGCAAGTGACATCGACGCCGGATTTGCTAGCACACGCAGGCGCC
GTTGTCCGGCCACTCTTGGCAATGGCGATGGAAATTTGGCAGCACTTGAT
CTGGTGACACCCAATTCCTTTGACAACAACTACTTCAAGAACCTGCTGCA
GAAGAAGGGTCTTCTGGAGTCTGATCAAGTCCTTTTTAGCGGTGGATCCA
CAGATAACATAGTCTCAGAATATAGCAGGAACCCTTCTACTTTCAAGTCT
GACTTTGCGACCGCCATGATCAAAATGGGAGATATCGAACCTCTAACCGG
TTCAGCTGGGATAGTAAGGAGGATTTGCAGCGCTATCAACTAG
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protein sequence of Tc02v2_p025740.1

>Tc02v2_p025740.1 ID=Tc02v2_p025740.1|Name=Tc02v2_p025740.1|organism=Theobroma cacao|type=polypeptide|length=331bp
MLIAVGNFLSLVARRAAVVVILLLLMSDCQCRAQLSSTFYDKTCPNALRT
IRTAIRTAIARERRMAASLIRLHFHDCFVQGCDASILLDDASSITSEKNA
LQNKDSARGYEVIDKAKSDVEHICPGVVSCADILAVAARDASEYVGGPSW
RVKLGRRDSTTASVSLATSQLPRFTASLESLIDLFRSKGLSARDMVALSG
SHTIGQAQCVTFRNRIYNNASDIDAGFASTRRRRCPATLGNGDGNLAALD
LVTPNSFDNNYFKNLLQKKGLLESDQVLFSGGSTDNIVSEYSRNPSTFKS
DFATAMIKMGDIEPLTGSAGIVRRICSAIN*
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