Tc02v2_t025730.1

Overview
NameTc02v2_t025730.1
Unique NameTc02v2_t025730.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length993
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 107 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
Productlignin-forming anionic peroxidase
NoteLignin-forming anionic peroxidase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18609926
GenbankXM_018115086.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g025730Tc02v2_g025730Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p025730.1Tc02v2_p025730.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto128309auto128309Theobroma cacaoexon
exon-auto128310auto128310Theobroma cacaoexon
exon-auto128311auto128311Theobroma cacaoexon
exon-auto128312auto128312Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto128313auto128313Theobroma cacaoCDS
CDS-auto128314auto128314Theobroma cacaoCDS
CDS-auto128315auto128315Theobroma cacaoCDS
CDS-auto128316auto128316Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t025730.1 ID=Tc02v2_t025730.1|Name=Tc02v2_t025730.1|organism=Theobroma cacao|type=mRNA|length=993bp
ATGGTAATAGCTGTTAGAAATTCTTTGTCACTCGTAGCAAGTAGAGCTGC
TGTTATGGTGATTCTGTTGCTTTTGATCAGCGACTGCCAATGCCAAGCAC
AACTTTATTCTACATTTTATGAAAAGTCATGCCCAAATGCACTTGGGACC
ATTCGCACAGCCATCAGAACCGCTATTGCACGAGAGCGTAGAATGGCTGC
TTCTCTAATTCGCCTTCATTTCCATGACTGCTTTGTTCAGGGATGTGATG
CCTCGATCTTACTAGACGATGCCCCCTCAATCACAAGCGAAAAGGATGCA
CTCCAAAACAAAGACTCTGCAAGAGGTTATGAAGTCATTGACAAGGCAAA
ATCTGATGTGGAACACATTTGTCCTGGGGTTGTATCTTGTGCAGATATCC
TCGCAGTTGCAGCCAGGGATGCCTCAGAATACGTGGGTGGCCCATCTTGG
ACAGTGAAGCTTGGGAGAAGAGATTCAACCACTGCTAGTGTTAGTCTGGC
AACCAGTCAACTTCCTCGTTTCACAGCCAGCCTCAAAAGCCTAATCGATC
TCTTTAGGAGCAAGGGCCTTAGTGCAAGAGACATGGTTGCTCTGTCAGGT
TCCCATACCATTGGACAAGCTCAATGCGTTACATTTCGGAACAGGATATA
CAACAATGCAAGTGACATCGACGCCGGATTTGCTAGCACACGCAGGCGCC
GTTGTCCGGCCACTCTTGGCAATGGCGATGGAAATTTGGCAGCACTTGAT
CTGGTGACACCCAATTCCTTTGACAACAACTACTTCAAGAACCTGATGCA
GAAGAAGGGTCTTCTGGAGTCTGATCAAGTCCTTTTTAGCGGTGGTTCCA
CAGATAACATAGTCTCAGAATATAGCAGGAACCCTTCAACTTTCAAGTCT
GATTTTGCAGCTGCCATGATCAAAATGGGAGATATCGAACCTCTAACCGG
TTCAGCTGGGATAATAAGGAGGATTTGCAGCCGTGTTGACTAG
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protein sequence of Tc02v2_p025730.1

>Tc02v2_p025730.1 ID=Tc02v2_p025730.1|Name=Tc02v2_p025730.1|organism=Theobroma cacao|type=polypeptide|length=331bp
MVIAVRNSLSLVASRAAVMVILLLLISDCQCQAQLYSTFYEKSCPNALGT
IRTAIRTAIARERRMAASLIRLHFHDCFVQGCDASILLDDAPSITSEKDA
LQNKDSARGYEVIDKAKSDVEHICPGVVSCADILAVAARDASEYVGGPSW
TVKLGRRDSTTASVSLATSQLPRFTASLKSLIDLFRSKGLSARDMVALSG
SHTIGQAQCVTFRNRIYNNASDIDAGFASTRRRRCPATLGNGDGNLAALD
LVTPNSFDNNYFKNLMQKKGLLESDQVLFSGGSTDNIVSEYSRNPSTFKS
DFAAAMIKMGDIEPLTGSAGIIRRICSRVD*
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