Tc02v2_t025710.1

Overview
NameTc02v2_t025710.1
Unique NameTc02v2_t025710.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length990
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 123 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
Productlignin-forming anionic peroxidase
NoteLignin-forming anionic peroxidase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18609921
GenbankXM_018114547.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g025710Tc02v2_g025710Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p025710.1Tc02v2_p025710.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto128287auto128287Theobroma cacaoexon
exon-auto128288auto128288Theobroma cacaoexon
exon-auto128289auto128289Theobroma cacaoexon
exon-auto128290auto128290Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto128291auto128291Theobroma cacaoCDS
CDS-auto128292auto128292Theobroma cacaoCDS
CDS-auto128293auto128293Theobroma cacaoCDS
CDS-auto128294auto128294Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t025710.1 ID=Tc02v2_t025710.1|Name=Tc02v2_t025710.1|organism=Theobroma cacao|type=mRNA|length=990bp
ATGGTCACCGTATTTAGAAACTCTTTGTCATGCCAAGCGAATAGAGTTGC
TGCTGTGGTGATGCTGCTGCTTTTGAGCAGCGCATGCCAAGCAAAACTTT
CTTCTACTTTTTATGAAAAGTCATGCCCAAATGCACTTAGTACCATTCGA
AAACCCATCAGAATGGCTATTGCACGAGAGCGTAGAATGGCTGCATCTCT
TATTCGCCTTCATTTCCATGATTGCTTTGTTCAGGGATGTGATGCCTCAA
TCTTACTAGATAATTCCCCTTCAGTCCCAAGCGAAAAGCTTGCACCGCCG
AACAACCACTCTGTAAGAGGTTTTGAAGTCATTGATCAGGCAAAATCTGC
GGTGGAGAAAGTTTGTCCTGGAGTTGTGTCTTGTGCAGACATCCTTGCAG
TTGCAGCCAGGGATGCCTCTGTATACGTAGGTGGCCCATCTTGGACAGTG
AAGCTTGGAAGAAGAGATTCTACCACTGCAAGCCCATGTCTGGCTTGCAG
TGATCTTCCACGTCCTAACGATAGCCTTAAACGCCTTATCTCTCGCTTTA
GAGCCAAGGGCCTTAGTGCAAGGGACATGGTTGCTTTGTCAGGGGCTCAT
ACTATAGGACAAGCTCAATGCTTCACATTTCAGGAAAGGATATACAGCAA
CGGAAGTAACATCGACGCTGGATTTGCTAGCAAACGCAGGCTCCGTTGTC
CCGCCACTCCTGGCGATGGTAAGAGTAATTTGGCAGCACTCGATCTGGTT
ACGCCCAATTCCTTTGACAACAACTACTTCAAGAACCTGTTGCAAAAGAA
AGGTCTTCTACAGTCGGATCAAGTCCTGTTTAGTGGTGGATCCACGGATG
ACATAGTCTCCGAGTATAGCAGGAACCCCTGTACTTTCAAGTCTGACTTT
GCAACTGCCATGATCAAAATGGGAAATATCAAACCTCCAACTGGTTCAGC
TGGGATAATAAGGAAGATTTGCAGTCAAGTCAATAATTAG
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protein sequence of Tc02v2_p025710.1

>Tc02v2_p025710.1 ID=Tc02v2_p025710.1|Name=Tc02v2_p025710.1|organism=Theobroma cacao|type=polypeptide|length=330bp
MVTVFRNSLSCQANRVAAVVMLLLLSSACQAKLSSTFYEKSCPNALSTIR
KPIRMAIARERRMAASLIRLHFHDCFVQGCDASILLDNSPSVPSEKLAPP
NNHSVRGFEVIDQAKSAVEKVCPGVVSCADILAVAARDASVYVGGPSWTV
KLGRRDSTTASPCLACSDLPRPNDSLKRLISRFRAKGLSARDMVALSGAH
TIGQAQCFTFQERIYSNGSNIDAGFASKRRLRCPATPGDGKSNLAALDLV
TPNSFDNNYFKNLLQKKGLLQSDQVLFSGGSTDDIVSEYSRNPCTFKSDF
ATAMIKMGNIKPPTGSAGIIRKICSQVNN*
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