Tc02v2_t024870.1

Overview
NameTc02v2_t024870.1
Unique NameTc02v2_t024870.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1848
Properties
Property NameValue
NoteDELLA protein GAI1
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
ProductDELLA protein GAIP-B
Cross References
External references for this mRNA
DatabaseAccession
GeneID18609825
GenbankXM_018116333.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g024870Tc02v2_g024870Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p024870.1Tc02v2_p024870.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto126654auto126654Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto126655auto126655Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t024870.1 ID=Tc02v2_t024870.1|Name=Tc02v2_t024870.1|organism=Theobroma cacao|type=mRNA|length=1848bp
ATGAAAAGAGACCACCATCATCTCCAAACCAACCCAGACCCATCGACTGT
CGGCAGCTCCTCCGTCTGCGGTGGTTCTACAACCGGAAAGGCCAAGATGT
GGCAGGAAGAAGCCGCCCAACAAGACTGTGGAATGGATGAGCTTTTGGCG
GTTCTTGGGTACAAGGTTAAAACTTCAGACATGGCAGAAGTGGCTCAAAA
GCTTGAGCAGTTAGAGGAGGTTATGTGTAATGTTCAAGATGATGGGATTT
CACATCTTGCTTCCGAAACCGTTCATTATAATCCTTCCGATCTATCAACT
TGGCTCGAAAGCATGCTCTCTGAGCTTAACCCTCCCTCCACTTTTGATCC
TGTTGTCACTGCTGGACCGGCTGCGGCGGCTACGTTAGATGATTCGTTTC
TTGGTCCGGCTGAGTCTTCGACTTTAACGACGTTGGATTTCGACAACAAC
AATCAAAAACATCAGAAAAAAGGGCGACAACTCTTTGAGGAAGCTTCGTG
TTCAGATTATGATCTCAAAGCAATTCCTGGTAAGGCTATTTATTCTCAAA
AAACCCAAACCCATGATTCCTCTTCTTCTTCCACTCAAAACAACGTTGTT
AAATCCGAAAAGCGCTTGAAATCTACATCCGGGTCGCACTCGGATATCTA
TCCTCCTCCTGCTTCATCCTATGGAATTCCGGCTGAGTCAACTCGTCCTG
TTGTCCTGGTTGACTCACAAGAAAACGGAATCCGGCTGGTCCATGCTTTG
ATGGCATGTGCAGAAGCTGTCCAGCAAAACAATCTCAATCTCGCCGAAGC
GCTGGTAAAACAAGTTGGGTTTTTAGCGAGTTCTCAAGCTGGGGCTATGA
GGAAAGTGGCTACGTATTTTGCTGAAGCATTAGCTCGAAGGATTTATAGA
TTATATCCTCAAAACCCACTCGACCATTCTTTATCAGATGTTCTTCACAT
GCACTTCTACGAGACTTGCCCTTATCTAAAGTTTGCCCACTTCACAGCTA
ACCAAGCGATTCTCGAAGCTTTTGAAGGCAAAAAAAGGGTTCACGTCATC
GATTTTTCGATGAACCAAGGCATGCAATGGCCTGCTTTGATGCAAGCCTT
AGCGTTAAGAGGTGGTGGTCCGCCGACTTTTAGGTTAACTGGGATTGGAC
CTCCCAGCCATGATAACTCGGATCACTTGCAAGAAGTTGGTTGGAAATTG
GCTCAATTAGCTGAAACGATTCACGTTGAGTTTGAATATCGTGGGTTCGT
GGCTAATTCTTTGGCCGATTTGGATGCTTCAATGCTTGATCTTAGACCCA
GTGAAGGTGAAGCCGTGGCCGTTAACTCCGTTTTTGAGTTACATAAATTA
TTGGCTCGTCCGGGTGCTATTGACAAAGTTTTATCCGTGGTGAAACAGAT
GAAGCCTGAGATTGTCACTATAGTTGAGCAAGAAGCGAACCATAACGGTC
CGGTTTTCTTAGACCGATTCACTGAGTCGTTACATTATTACTCGACGCTT
TTTGACTCGTTGGAGGGGTCGGTGAGTAGTCAGGATAAGGTTATGTCGGA
GGTGTACTTGGGGAAACAGATTTGTAATGTGGTGGCCTGTGAAGGGGTGG
ACCGAGTTGAGAGGCACGAGAAGTTGGCTCACTGGAGAAATCGGTTGGGT
ACGGCCGGTTTTGCGTCTGTTCATTTGGGCTCTAATGCGTTCAAGCAAGC
TAGTATGTTGTTGGCTTTGTTTGCTGGAGGAGATGGGTATGGGGTGGAGG
AGAATAATGGGTGTTTGATGCTGGGTTGGCACAGTCGCCCACTCATAGCA
ACTTCTGCTTGGAAACTCGCCAACAAAACAGCTGCTACTGCCCACTGA
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protein sequence of Tc02v2_p024870.1

>Tc02v2_p024870.1 ID=Tc02v2_p024870.1|Name=Tc02v2_p024870.1|organism=Theobroma cacao|type=polypeptide|length=616bp
MKRDHHHLQTNPDPSTVGSSSVCGGSTTGKAKMWQEEAAQQDCGMDELLA
VLGYKVKTSDMAEVAQKLEQLEEVMCNVQDDGISHLASETVHYNPSDLST
WLESMLSELNPPSTFDPVVTAGPAAAATLDDSFLGPAESSTLTTLDFDNN
NQKHQKKGRQLFEEASCSDYDLKAIPGKAIYSQKTQTHDSSSSSTQNNVV
KSEKRLKSTSGSHSDIYPPPASSYGIPAESTRPVVLVDSQENGIRLVHAL
MACAEAVQQNNLNLAEALVKQVGFLASSQAGAMRKVATYFAEALARRIYR
LYPQNPLDHSLSDVLHMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVI
DFSMNQGMQWPALMQALALRGGGPPTFRLTGIGPPSHDNSDHLQEVGWKL
AQLAETIHVEFEYRGFVANSLADLDASMLDLRPSEGEAVAVNSVFELHKL
LARPGAIDKVLSVVKQMKPEIVTIVEQEANHNGPVFLDRFTESLHYYSTL
FDSLEGSVSSQDKVMSEVYLGKQICNVVACEGVDRVERHEKLAHWRNRLG
TAGFASVHLGSNAFKQASMLLALFAGGDGYGVEENNGCLMLGWHSRPLIA
TSAWKLANKTAATAH*
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