Tc02v2_t024430.1

Overview
NameTc02v2_t024430.1
Unique NameTc02v2_t024430.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length486
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productuncharacterized LOC108660955
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID108660955
GenbankXM_018115950.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g024430Tc02v2_g024430Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p024430.1Tc02v2_p024430.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto125961auto125961Theobroma cacaoexon
exon-auto125962auto125962Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto125963auto125963Theobroma cacaoCDS
CDS-auto125964auto125964Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t024430.1 ID=Tc02v2_t024430.1|Name=Tc02v2_t024430.1|organism=Theobroma cacao|type=mRNA|length=486bp
ATGGCGTTCTCTAACTGGAACACTGTGGGAAGTCTGGTTACTCCGGCTGT
GGAGAAAGAAGACTTTTTACCCAGCAAAAGATCAGTCATGGTTGCTACCA
AGATAAAGACAGCTTTTGTTCCTCTTCAGGTGAAGTGCGAGAAAAGACAT
AAATCATTGACAACAAAATGCTTTGCTGTTTCACGTAGAGATATGATGCA
ATGTCTAACTGCTGAAGTTCTTGGTCTTGCCCTTCTTCCAAAACCTGCCA
TAGCTCGTGTTAGTAGACTCGAGATGAGGAAAAAGATAATGGAGAAGCTT
GAGGAGCTTAGGGAGAAGGCTGGGCTATCTAAGCCAAAAACTGAGAATGA
GATGAAGTCTCCAACAAAACCGTCACCAAAGGATAAGAAGTCTCCAACTT
TGCCACTGCCACCTCCAGAAAGCGCAGTTCAACTGTTGGTGGAAGTAACC
CTCAGCAACATCCCTCCTTCAAATAATGCTTTGTGA
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protein sequence of Tc02v2_p024430.1

>Tc02v2_p024430.1 ID=Tc02v2_p024430.1|Name=Tc02v2_p024430.1|organism=Theobroma cacao|type=polypeptide|length=162bp
MAFSNWNTVGSLVTPAVEKEDFLPSKRSVMVATKIKTAFVPLQVKCEKRH
KSLTTKCFAVSRRDMMQCLTAEVLGLALLPKPAIARVSRLEMRKKIMEKL
EELREKAGLSKPKTENEMKSPTKPSPKDKKSPTLPLPPPESAVQLLVEVT
LSNIPPSNNAL*
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