Tc02v2_t023550.1

Overview
NameTc02v2_t023550.1
Unique NameTc02v2_t023550.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1299
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 9 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
Productvinorine synthase
NotePutative Vinorine synthase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18609669
GenbankXM_007044902.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g023550Tc02v2_g023550Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p023550.1Tc02v2_p023550.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto123766auto123766Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto123767auto123767Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t023550.1 ID=Tc02v2_t023550.1|Name=Tc02v2_t023550.1|organism=Theobroma cacao|type=mRNA|length=1299bp
ATGAAGCTCGAGGTTGAAGTAATGTCCAAAGAGATTATCAAGCCATCATC
CCCAACCCCTGATCAGCTTCGCCATTACCAACTCTCTTTTCTTGATCAAA
TATCTCCGCCCGTCTATAACCCTTTGGTTCTATTCTACCCGATGACCGAA
TGCAATATCCAAGTAAACAAAACCAAGATTACCGACCACCTTAAACAGTC
CATGTCCAATGCCCTATCCTATTTTTACCCACTAGCCGGACGGATTAAGG
ATAATCGGCTTGTAGACTGCAATGATGAGGGCATACCCTTTTTGGAAGCC
CAAGTCAAGTGCAAACTTTCAGATATCCTAGAAAACCCTGCTCCTAGTGA
ACTCAACAAATTACTTCCGTTTGTACTAGATGATGCTGAGGAATTGCCCT
TAGGAATCCAATTCAACATTTTTGATTCTGGAGGCATATGTATTGGTGTA
TGTATTTCTCACAAACTTGCAGATGCCCTGTCGTTTTTCACATTTGTAAA
TACTTGGGCAGCCATTGCTCGTGGAGAGAGTTACATAGTGTCTCCAGAAT
TTGCATCGGCCAAATTGTTCCCTCCAAAGAGCACATTAGGATTTGAACCG
AGAACTGGCATATCAACAGAAGGAATTGTAACGAAGAGGTTTGTGTTTAC
TGCCTCTAAAATACAGGAAATCAAAGCAAAATACACTAAGAGTACTGCAA
GTGCCGAAAACCAGAAAGGCCCATCACGCATTGAGGCATTATCGACTTTC
ATATGGAGCCGTTTTGTTGCTGCAACCAAAGCAAAACCAATCCCTGATAA
CTGCTTCTACACAATCATTCATGCAGTAAACTTACGCCCAAGACTAGACC
CGCCGCTAGCAGAACATTCTTTTGGCAATTTTTACCGGATTGCAATGACA
GTTCCATCCATAAACTCTGAAGAAGATTGTTGTAGTCTCGTTTACCAGAT
AAGGGACTCCATAAGAAAACTTGACATGAAATTTGTTCGGCAACTTCAAG
ATGGGCAGAGTTACTTTGACTTCATGAAAGAAAGAGCTGAAAGTTTCATC
AGAGGAGAGATTGTTTCCTTTAGCTTCACTAGTTTATGCAGGTTTCCTAT
GTATAAAGCTGACTTTGGTTGGGGGAAACCCATTTGGGTGGGTTCTGCTA
GCCTTACTTTTAAGAATCTAGTAGTTTTCATGGATACTGTATCTGGGGAT
GGAATAGAGGCTTGGGTCAGCCTAAAGGAAGAAGATATGGCTATGTTTGG
AAGCGACGAAGTATTGCTTGCATATGTTGTTTCCCCAAGAAGCTGCTAA
back to top

protein sequence of Tc02v2_p023550.1

>Tc02v2_p023550.1 ID=Tc02v2_p023550.1|Name=Tc02v2_p023550.1|organism=Theobroma cacao|type=polypeptide|length=433bp
MKLEVEVMSKEIIKPSSPTPDQLRHYQLSFLDQISPPVYNPLVLFYPMTE
CNIQVNKTKITDHLKQSMSNALSYFYPLAGRIKDNRLVDCNDEGIPFLEA
QVKCKLSDILENPAPSELNKLLPFVLDDAEELPLGIQFNIFDSGGICIGV
CISHKLADALSFFTFVNTWAAIARGESYIVSPEFASAKLFPPKSTLGFEP
RTGISTEGIVTKRFVFTASKIQEIKAKYTKSTASAENQKGPSRIEALSTF
IWSRFVAATKAKPIPDNCFYTIIHAVNLRPRLDPPLAEHSFGNFYRIAMT
VPSINSEEDCCSLVYQIRDSIRKLDMKFVRQLQDGQSYFDFMKERAESFI
RGEIVSFSFTSLCRFPMYKADFGWGKPIWVGSASLTFKNLVVFMDTVSGD
GIEAWVSLKEEDMAMFGSDEVLLAYVVSPRSC*
back to top