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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns |
Product | probable polygalacturonase At1g80170, transcript variant X2 |
Note | Putative Probable polygalacturonase At1g80170 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t022050.2 ID=Tc02v2_t022050.2|Name=Tc02v2_t022050.2|organism=Theobroma cacao|type=mRNA|length=1323bp ATGTCTTATTGGATTTATACAAATCAATCAATCTTCCAAACAGAAAAAAA AAAGGAACAAATCATGGATAAATTATTCCTGGTTTCCTTCCTTGGTTTGC TGATAGCAGCATGTGGAGTAGCAGGAAACATGCTAGATGACAACTTTAAC CTACTTAGAGAGGCTGAAGACCTGGACATAGCAGAAGATGATGTGGAACT TTTTGAGATCCCATCTTGGACAAGTGAACGTGGTGGCAAGGTTCTTGTGA ATGTGGATAGCTTTGGTGCAGTTGGAGATGGAGTTTCTGATGACACCCAG ATCGATGGAACAATAGTAGCACCAGATGAACCTAAGAACTGGGACCCAGA TCTTGCACGACTCTGGCTTGATTTTTCTAAGCTGCACGGAGTGGCGTTCC AAGGAAACGGAGTTATTGATGGCTCTGGCGGCAAATGGTGGGCATCTTCT TGCAAAAAGAACAAGTCAAATCCTTGCAGAGGGGCACCAACAGCACTGAC TATAGATTCAAGCTCATCTATTAAGGTAAAAGGCCTTACCATTCAGAACA GCCAACAGATGAATTTCGTCATTTCCAAGTCTGAATCTGTACGAGTATAT GAAGTACGAGTCTCATCTCCAGGAGACAGTCCAAACACTGATGGGATCCA CATAACTGGATCAACTAATGTTGTTCTTCAAGACTGCAAAATAGGAACAG GGGATGATTGCATCTCAATTGTCAATGCTTCATCTGCTATCAAGATGAAG AGAATATATTGTGGACCAGGACATGGAGTCAGCATTGGAAGCCTTGGGAA GGATAACTCCATGGGCATTGTTACGAAGGTGGTCTTGGATACAGCATTTC TAAGGGAGACTAGCAATGGGGTCAGGATTAAAACTTGGCAGGGTGGTTCC GGTTATGTTCGTGGGGTGCGTTTCGAAAATGTGAGGATGGAAGATGTTGC CAACCCCATCATTATTGATCAATTCTACTGCGATTCACCAACAACCTGCC AAAACCAGACATCAGCAGTGCAAATAAGCCAGATTATGTACCGAAACATT AGTGGGATAACAAAAAGCACAGAAGCAATGAAGTTTGCCTGCAGTGATAC TGTTCCCTGCCTCAATATAGTGCTGAGCAATATAAACTTAGAGAAAAAGG ATGGCACGGTGGAGACCTACTGCAACTCCGCCCAAGGCTTTGGCTATGGT GTCGTGCATCCTTCAGCTGACTGCCTAAGTTCCCACGACAAAGGCTCTAT TCTTATTGATCAGAAAGAAAATGCGGAGCTTGTTGAACCCACCAGAGATC ATATTGCTCACACAGAACTCTAA back to topprotein sequence of Tc02v2_p022050.2 >Tc02v2_p022050.2 ID=Tc02v2_p022050.2|Name=Tc02v2_p022050.2|organism=Theobroma cacao|type=polypeptide|length=441bp
MSYWIYTNQSIFQTEKKKEQIMDKLFLVSFLGLLIAACGVAGNMLDDNFN LLREAEDLDIAEDDVELFEIPSWTSERGGKVLVNVDSFGAVGDGVSDDTQ IDGTIVAPDEPKNWDPDLARLWLDFSKLHGVAFQGNGVIDGSGGKWWASS CKKNKSNPCRGAPTALTIDSSSSIKVKGLTIQNSQQMNFVISKSESVRVY EVRVSSPGDSPNTDGIHITGSTNVVLQDCKIGTGDDCISIVNASSAIKMK RIYCGPGHGVSIGSLGKDNSMGIVTKVVLDTAFLRETSNGVRIKTWQGGS GYVRGVRFENVRMEDVANPIIIDQFYCDSPTTCQNQTSAVQISQIMYRNI SGITKSTEAMKFACSDTVPCLNIVLSNINLEKKDGTVETYCNSAQGFGYG VVHPSADCLSSHDKGSILIDQKENAELVEPTRDHIAHTEL* back to top
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