Tc02v2_t021990.1

Overview
NameTc02v2_t021990.1
Unique NameTc02v2_t021990.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length546
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 45 ESTs, 115 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
ProductADP-ribosylation factor 2
NoteADP-ribosylation factor 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18609483
GenbankXM_007044613.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g021990Tc02v2_g021990Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p021990.1Tc02v2_p021990.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto120548auto120548Theobroma cacaoexon
exon-auto120549auto120549Theobroma cacaoexon
exon-auto120550auto120550Theobroma cacaoexon
exon-auto120551auto120551Theobroma cacaoexon
exon-auto120552auto120552Theobroma cacaoexon
exon-auto120553auto120553Theobroma cacaoexon
exon-auto120554auto120554Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto120555auto120555Theobroma cacaoCDS
CDS-auto120556auto120556Theobroma cacaoCDS
CDS-auto120557auto120557Theobroma cacaoCDS
CDS-auto120558auto120558Theobroma cacaoCDS
CDS-auto120559auto120559Theobroma cacaoCDS
CDS-auto120560auto120560Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t021990.1 ID=Tc02v2_t021990.1|Name=Tc02v2_t021990.1|organism=Theobroma cacao|type=mRNA|length=546bp
ATGGGGCTGACATTCACGAAGCTTTTCAGCCGGCTTTTTGCCAAGAAAGA
GATGCGAATTTTGATGGTGGGTCTTGATGCAGCTGGTAAGACTACCATCT
TATACAAGCTCAAGCTAGGAGAGATTGTCACCACAATTCCTACCATTGGG
TTTAATGTGGAGACTGTGGAATATAAGAACATCAGTTTCACCGTGTGGGA
TGTTGGTGGTCAGGACAAGATTCGTCCCTTGTGGAGGCATTACTTCCAGA
ATACGCAGGGTCTCATCTTTGTGGTTGACAGCAACGACAGAGACCGTGTT
GTTGAGGCTAGGGATGAATTGCATAGAATGTTGAATGAGGATGAGCTGCG
AGATGCAGTCTTGCTTGTATTTGCAAACAAGCAGGATCTTCCAAATGCAA
TGAATGCTGCAGAAATTACTGATAAGCTTGGCCTCCATTCCCTTCGACAG
CGTCACTGGTACATCCAGAGCACCTGTGCAACCTCTGGTGAGGGGCTTTA
TGAGGGCCTGGACTGGCTTTCAAACAACATAGCTAACAAGGCCTGA
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protein sequence of Tc02v2_p021990.1

>Tc02v2_p021990.1 ID=Tc02v2_p021990.1|Name=Tc02v2_p021990.1|organism=Theobroma cacao|type=polypeptide|length=182bp
MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRV
VEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQ
RHWYIQSTCATSGEGLYEGLDWLSNNIANKA*
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