Tc02v2_t020540.1

Overview
NameTc02v2_t020540.1
Unique NameTc02v2_t020540.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length702
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productglutathione S-transferase U17
NoteGlutathione S-transferase U17
Cross References
External references for this mRNA
DatabaseAccession
GeneID18609306
GenbankXM_007044342.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g020540Tc02v2_g020540Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p020540.1Tc02v2_p020540.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto117622auto117622Theobroma cacaoexon
exon-auto117623auto117623Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto117624auto117624Theobroma cacaoCDS
CDS-auto117625auto117625Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t020540.1 ID=Tc02v2_t020540.1|Name=Tc02v2_t020540.1|organism=Theobroma cacao|type=mRNA|length=702bp
ATGGCATTGAGTGACGTGAAAGTGTTGGGTTCATGGCCAAGCCCGTTTGT
GCTGCGGCCAAGAATTGCCCTTCACCTGAAATCTGTAAACTACGAGTACA
TCGAGGAAAATCTATTGGAATCCAAAAGCGAGCTACTACTCAAATCAAAC
CCTGTTTTCAAGAAAGTCCCAGTTCTCTTACATGGTGACAAGCCGATCTG
TGAGTCTCTCATCATTGTCCAATACATCGATGAGGTCTGGTCCTCTGGCC
CTTCCATTCTTCCTTCCGATCCTTATGAACGTGCCAATTCTCGATTTTGG
GCTGCCTATATTGACGAAAAGTGGTTCCCTGCCTTGAGAGGAGTGTTGGC
TGCTGAATCGGAGGATGCTAAAAAGGCAGCCATAGCGCAAGTGGAAGAAG
GGCTGGTGCTGTTGGAGGAAGTATTTGGAAAGTTGAGCCAAGGTAAACCT
TTCTTTGGTGGGGACCAAATCGGGTACCTGGACATTGCACTCGGGTCATT
CTTGGTCTGGTTAAAAGTCATAGAGAAGATTAGTGAGATGAAGCTGCTTA
CTGAAGCCAAGACACGTTGCTTGCTCGAGTGGGCTCATAGGTTCTCCTCT
CATGTGGCTGTGAAGGATGTTATGCCTGAGGCTGACAAGCTTGCAGAGTT
TGGTGTAAAGCTTAGAGCGAAGATCTTGAAAGCGAGGGCTATTCCAAAGT
GA
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protein sequence of Tc02v2_p020540.1

>Tc02v2_p020540.1 ID=Tc02v2_p020540.1|Name=Tc02v2_p020540.1|organism=Theobroma cacao|type=polypeptide|length=234bp
MALSDVKVLGSWPSPFVLRPRIALHLKSVNYEYIEENLLESKSELLLKSN
PVFKKVPVLLHGDKPICESLIIVQYIDEVWSSGPSILPSDPYERANSRFW
AAYIDEKWFPALRGVLAAESEDAKKAAIAQVEEGLVLLEEVFGKLSQGKP
FFGGDQIGYLDIALGSFLVWLKVIEKISEMKLLTEAKTRCLLEWAHRFSS
HVAVKDVMPEADKLAEFGVKLRAKILKARAIPK*
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