Tc02v2_t017980.2

Overview
NameTc02v2_t017980.2
Unique NameTc02v2_t017980.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length483
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Productdisease resistance protein At4g27190-like, transcript variant X3
NotePutative Disease resistance protein At4g27190
Cross References
External references for this mRNA
DatabaseAccession
GeneID108660596
GenbankXM_018114802.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g017980Tc02v2_g017980Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p017980.2Tc02v2_p017980.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto114376auto114376Theobroma cacaoexon
exon-auto114377auto114377Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto114378auto114378Theobroma cacaoCDS
CDS-auto114379auto114379Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t017980.2 ID=Tc02v2_t017980.2|Name=Tc02v2_t017980.2|organism=Theobroma cacao|type=mRNA|length=483bp
ATGGATGCTAAGAAGGCTTTACCGATCGATGTTTTGGAAGAAATAGAAGC
TTGGAACCTGTTTAAGGAGACGGCTGAGAACGATTTTAAAGATTCTGAGT
TACGATCTGTAGCAACTGAGGTGGCCAAAAAGTGTGCAGGATTACCCGTC
GCCATTGTGACAGTTGCAAGAGCATTGAGAAGCAAAGAGTTATATGCCTG
GAAGGATGCTCTTGCGCAACTTCAGAGGCCTTCTCCAAGCGACATGCAAT
CAGGGGTACCAGCAGCTGTATATTCAGCTATAGAGCTGAGTTACAATAAT
TTAAAAAGTGAAGAACTCAAACAGACTTTCTTGCTTTGCGGTCTACTAGG
CCATAACGCTCGTGCTGAAGACTTGGTGAGATATGGCATGGGTTTACGTT
TATTTGAAAATGTGGACACAGTAGAAGACACGCGAAACAGAGTGTTGACA
CTGGGACAACCATACATTTGCATTGAAACATGA
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protein sequence of Tc02v2_p017980.2

>Tc02v2_p017980.2 ID=Tc02v2_p017980.2|Name=Tc02v2_p017980.2|organism=Theobroma cacao|type=polypeptide|length=161bp
MDAKKALPIDVLEEIEAWNLFKETAENDFKDSELRSVATEVAKKCAGLPV
AIVTVARALRSKELYAWKDALAQLQRPSPSDMQSGVPAAVYSAIELSYNN
LKSEELKQTFLLCGLLGHNARAEDLVRYGMGLRLFENVDTVEDTRNRVLT
LGQPYICIET*
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