Tc02v2_t017980.1

Overview
NameTc02v2_t017980.1
Unique NameTc02v2_t017980.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length573
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productdisease resistance protein At4g27190-like, transcript variant X2
NotePutative Probable disease resistance protein At4g27220
Cross References
External references for this mRNA
DatabaseAccession
GeneID108660596
GenbankXM_018114801.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g017980Tc02v2_g017980Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p017980.1Tc02v2_p017980.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto114368auto114368Theobroma cacaoexon
exon-auto114369auto114369Theobroma cacaoexon
exon-auto114370auto114370Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto114371auto114371Theobroma cacaoCDS
CDS-auto114372auto114372Theobroma cacaoCDS
CDS-auto114373auto114373Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t017980.1 ID=Tc02v2_t017980.1|Name=Tc02v2_t017980.1|organism=Theobroma cacao|type=mRNA|length=573bp
ATGGATGCTAAGAAGGCTTTACCGATCGATGTTTTGGAAGAAATAGAAGC
TTGGAACCTGTTTAAGGAGACGGCTGAGAACGATTTTAAAGATTCTGAGT
TACGATCTGTAGCAACTGAGGTGGCCAAAAAGTGTGCAGGATTACCCGTC
GCCATTGTGACAGTTGCAAGAGCATTGAGAAGCAAAGAGTTATATGCCTG
GAAGGATGCTCTTGCGCAACTTCAGAGGCCTTCTCCAAGCGACATGCAAT
CAGGGGTACCAGCAGCTGTATATTCAGCTATAGAGCTGAGTTACAATAAT
TTAAAAAGTGAAGAACTCAAACAGACTTTCTTGCTTTGCGGTCTACTAGG
CCATAACGCTCGTGCTGAAGACTTGGTGAGATATGGCATGGGTTTACGTT
TATTTGAAAATGTGGACACAGTAGAAGACACGCGAAACAGAGTGTTGACA
CTGGATTACCGGAGCTCATTAGCTTCTGCTCTAAAAACAAATTGGGGTGC
TCTACTTCCACACCTCAGCATGAGTTGGCACTCTTCGGTGAAGAGGTGGA
GTTCCCTTGCTTGGAGAACCTAG
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protein sequence of Tc02v2_p017980.1

>Tc02v2_p017980.1 ID=Tc02v2_p017980.1|Name=Tc02v2_p017980.1|organism=Theobroma cacao|type=polypeptide|length=191bp
MDAKKALPIDVLEEIEAWNLFKETAENDFKDSELRSVATEVAKKCAGLPV
AIVTVARALRSKELYAWKDALAQLQRPSPSDMQSGVPAAVYSAIELSYNN
LKSEELKQTFLLCGLLGHNARAEDLVRYGMGLRLFENVDTVEDTRNRVLT
LDYRSSLASALKTNWGALLPHLSMSWHSSVKRWSSLAWRT*
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