Tc02v2_t017830.1

Overview
NameTc02v2_t017830.1
Unique NameTc02v2_t017830.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length786
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productflavonoid 3',5'-methyltransferase, transcript variant X2
NoteFlavonoid 3',5'-methyltransferase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18609023
GenbankXM_018114769.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g017830Tc02v2_g017830Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p017830.1Tc02v2_p017830.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto114157auto114157Theobroma cacaoexon
exon-auto114158auto114158Theobroma cacaoexon
exon-auto114159auto114159Theobroma cacaoexon
exon-auto114160auto114160Theobroma cacaoexon
exon-auto114161auto114161Theobroma cacaoexon
exon-auto114162auto114162Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto114163auto114163Theobroma cacaoCDS
CDS-auto114164auto114164Theobroma cacaoCDS
CDS-auto114165auto114165Theobroma cacaoCDS
CDS-auto114166auto114166Theobroma cacaoCDS
CDS-auto114167auto114167Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t017830.1 ID=Tc02v2_t017830.1|Name=Tc02v2_t017830.1|organism=Theobroma cacao|type=mRNA|length=786bp
ATGGCAGATTGGTTTAAGAAGACCATACTTTCTAGCAATGCCCTTCAAGA
GTATGTCTTAGAGACAAGTGCTTATCCTAAAGAGCACCAGCAATTGATGG
AAATAAGAGAGGCCACCATCGACAAGTATAAGGAGTGGAGCATGATGAAT
GTGGCTGCTGATGAAGGGCAGTTCCTCTCTGTGCTTCTAAAGATCATAAA
TGGCAAGAAAACCATGGGAATTGGAGTTTTCACAGGCTATTCCCTTCTTA
CTACTGCCCTTGCGTTGCCTGAGGATGGCAAGATAGTAGCTATTGATCCG
GATAAAGAAGCTTATGAGGTTGGACTACCGTTCATTAAGAAAGCTGGAAT
TGAGCACAAGATTAACTACATCCCATCAGATGCCTTTCCACTTCTAAACG
ATCTTATTTACTGCGTCAGCGCTGTCTTGACATACGCAATTAATGACCAA
AGTTCCAGAAAGCATACTAGTAGTTGTAGCTTTCATTGCTTGCACGGTGA
AGAAGATACCTTTGATTTCATATATGTGGACGCTTCCGAGAACGATTGCC
TGAAATTTCATGAGCTAGCACTGAAATTGGTCAAGATCGGAGGAATTATA
GCTGATGACAACACCCTATTTTTGGGTTCGGTTGCAAAATCAGACAAGGA
AATCATGGAGGAGCCTATTAGGAAACTCAGAAACTTCGTGATCGAATTCA
ATAGGTTCATAACAGCTGATCCTCGTGTTGAATCATCTCTTCTTTCCATT
GGTGATGGTCTTACTCTCTGCAGGCGTCTCTACTAG
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protein sequence of Tc02v2_p017830.1

>Tc02v2_p017830.1 ID=Tc02v2_p017830.1|Name=Tc02v2_p017830.1|organism=Theobroma cacao|type=polypeptide|length=262bp
MADWFKKTILSSNALQEYVLETSAYPKEHQQLMEIREATIDKYKEWSMMN
VAADEGQFLSVLLKIINGKKTMGIGVFTGYSLLTTALALPEDGKIVAIDP
DKEAYEVGLPFIKKAGIEHKINYIPSDAFPLLNDLIYCVSAVLTYAINDQ
SSRKHTSSCSFHCLHGEEDTFDFIYVDASENDCLKFHELALKLVKIGGII
ADDNTLFLGSVAKSDKEIMEEPIRKLRNFVIEFNRFITADPRVESSLLSI
GDGLTLCRRLY*
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