Tc02v2_t016770.1

Overview
NameTc02v2_t016770.1
Unique NameTc02v2_t016770.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length387
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Productuncharacterized LOC108660574, transcript variant X2
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID108660574
GenbankXM_018114686.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g016770Tc02v2_g016770Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p016770.1Tc02v2_p016770.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto112550auto112550Theobroma cacaoexon
exon-auto112551auto112551Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto112552auto112552Theobroma cacaoCDS
CDS-auto112553auto112553Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t016770.1 ID=Tc02v2_t016770.1|Name=Tc02v2_t016770.1|organism=Theobroma cacao|type=mRNA|length=387bp
ATGAAGAGAAAAAGGGAGAGAAAAACCGTGGGAGAGGAAGAGAAAAGGAA
TGAAAATTCTGCTCTTTTTTTTGGCACAGTTTTGTTGCACTTTGAGGGAG
GAAAAGAAAGCTTTTTGTTGCAATTTTTGGAGGAAGAAAAAGCTGAAATT
TTTGAGCTGGAAATTTTGGAGGTTTTGCTGCCATTAAAGGGCAGCAAAGT
GCTGCCAATTTGTGGAGAAAAATTGGAGCTATTTGCTGCCAATTTGTGCA
GAAAAATTGGAGCTATTTGTGCAGAAAAATTGGAGCTGTTTGTGCAGGAA
AAATTGGAGCTGTTTGCGCAGAAAAATTGGAGCTGTTTGCTGCCAATTTT
TGCAAAAAAATTGGACAGCATTGTGCTGCCAATTTGA
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protein sequence of Tc02v2_p016770.1

>Tc02v2_p016770.1 ID=Tc02v2_p016770.1|Name=Tc02v2_p016770.1|organism=Theobroma cacao|type=polypeptide|length=129bp
MKRKRERKTVGEEEKRNENSALFFGTVLLHFEGGKESFLLQFLEEEKAEI
FELEILEVLLPLKGSKVLPICGEKLELFAANLCRKIGAICAEKLELFVQE
KLELFAQKNWSCLLPIFAKKLDSIVLPI*
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