Tc02v2_t016230.1

Overview
NameTc02v2_t016230.1
Unique NameTc02v2_t016230.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1329
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 41 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Producttransaldolase
NoteTransaldolase (Fragments)
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608825
GenbankXM_007043708.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g016230Tc02v2_g016230Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p016230.1Tc02v2_p016230.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto111562auto111562Theobroma cacaoexon
exon-auto111563auto111563Theobroma cacaoexon
exon-auto111564auto111564Theobroma cacaoexon
exon-auto111565auto111565Theobroma cacaoexon
exon-auto111566auto111566Theobroma cacaoexon
exon-auto111567auto111567Theobroma cacaoexon
exon-auto111568auto111568Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto111569auto111569Theobroma cacaoCDS
CDS-auto111570auto111570Theobroma cacaoCDS
CDS-auto111571auto111571Theobroma cacaoCDS
CDS-auto111572auto111572Theobroma cacaoCDS
CDS-auto111573auto111573Theobroma cacaoCDS
CDS-auto111574auto111574Theobroma cacaoCDS
CDS-auto111575auto111575Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t016230.1 ID=Tc02v2_t016230.1|Name=Tc02v2_t016230.1|organism=Theobroma cacao|type=mRNA|length=1329bp
ATGGCAACCATTTCCAAGCTCTCTAATCCCAACCCAGCCGCATCTCTCTC
ATCATCTTTCAAACCCAGATCTTCTTCATCGCTTAAATGCTTCGTTGGGT
TCCGTGCCACGGGTAGTTTTGGCTCCAAGCTGGTTTCATCGTCTAGCTTG
TCCTTGACCAACAACCACCTTTTAAAGGGCTCTTTGGTTGTCAGATGTTC
TCTTGCTGATGGAAACGGTAGTTCAGTTAAGAGGACTACACTACATGATC
TCTATGAAAAAGAAGGGCAGAGTCCATGGTATGACAACCTTTGCAGGCCA
GTGACTGATTTGCTGCCACTGATTGCAAGTGGGGTTAGAGGTGTAACTAG
CAACCCAGCGATTTTCCAGAAGGCTATATCGTCGTCAAATGCTTATAATG
ATCAATTCAGGGAACTTGTACAGTCTGGAAAAGATATCGAAAGTGCATAT
TGGGAGTTAGTGGTGAAGGACATTCAAGATGCCTGTAAACTTTTTGAGCC
AATCTATGATCAAACAGATGGTGGTGATGGTTATGTTTCTGTTGAGGTTT
CTCCCAGACTTGCTGATGATACTGAAGGGACCATTGAGGCGGCTAAATAT
CTTCATAAAGTGGTTGATTGTCCCAATGTCTACATTAAAATTCCTGCAAC
AGCACCATGTATTCCTTCCATCAAGGAAGTTATTTCAAAAGGCATAAGCG
TCAATGTCACTCTCATATTCTCACTTGCTAGATATGAAGCTGTCATTGAT
GCTTACTTGGATGGCCTTGAGGCTTCTGGGCTGAGTGATCTCTCTAGGGT
TACAAGTGTTGCTTCCTTCTTTGTCAGTCGGGTAGACACTCTCATTGACA
AAATGCTCGAAAAGATTGGAACACCAGAGGCCCTTGATCTTCGAGGAAAG
GCTGCAGTAGCTCAAGCAGCTCTGGCATACCAGCTCTACCAGAAGAAATT
CTCTGGTCCAAGGTGGGAGGCTTTGGTGAAGAAGGGTGCCAAGAAACAGA
GGTTGCTCTGGGCCTCAACTAGTGTCAAGAACCCTGCTTACCCTGACACT
CTATACGTTGCTCCTCTAATTGGACCTGATACAGTTTCAACCATGCCTGA
CCAAGCTCTCCAAGCCTTCGTCGATCATGGCACAGTGTCAAGGACAATTG
ACACAAATGTGTCTGAAGCTGAAGGCATCTATAGTGCACTTGAGAAGTTG
GGGATTGACTGGGGCTATGTAGGCTCACAGCTCGAAGACGAGGGAGTCGA
AGCTTTCAAGAAGAGCTTTGACAGCCTTCTTGACACCTTGCAAGAGAAGG
CAAACTCTCTTAAATTGGTTAGCCTGTAA
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protein sequence of Tc02v2_p016230.1

>Tc02v2_p016230.1 ID=Tc02v2_p016230.1|Name=Tc02v2_p016230.1|organism=Theobroma cacao|type=polypeptide|length=443bp
MATISKLSNPNPAASLSSSFKPRSSSSLKCFVGFRATGSFGSKLVSSSSL
SLTNNHLLKGSLVVRCSLADGNGSSVKRTTLHDLYEKEGQSPWYDNLCRP
VTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIESAY
WELVVKDIQDACKLFEPIYDQTDGGDGYVSVEVSPRLADDTEGTIEAAKY
LHKVVDCPNVYIKIPATAPCIPSIKEVISKGISVNVTLIFSLARYEAVID
AYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGK
AAVAQAALAYQLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDT
LYVAPLIGPDTVSTMPDQALQAFVDHGTVSRTIDTNVSEAEGIYSALEKL
GIDWGYVGSQLEDEGVEAFKKSFDSLLDTLQEKANSLKLVSL*
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