Tc02v2_t015600.3

Overview
NameTc02v2_t015600.3
Unique NameTc02v2_t015600.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1197
Properties
Property NameValue
NoteTyrosine aminotransferase
Model evidenceSupporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Producttyrosine aminotransferase, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608756
GenbankXM_018114498.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g015600Tc02v2_g015600Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p015600.3Tc02v2_p015600.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto110596auto110596Theobroma cacaoexon
exon-auto110597auto110597Theobroma cacaoexon
exon-auto110598auto110598Theobroma cacaoexon
exon-auto110599auto110599Theobroma cacaoexon
exon-auto110600auto110600Theobroma cacaoexon
exon-auto110601auto110601Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto110602auto110602Theobroma cacaoCDS
CDS-auto110603auto110603Theobroma cacaoCDS
CDS-auto110604auto110604Theobroma cacaoCDS
CDS-auto110605auto110605Theobroma cacaoCDS
CDS-auto110606auto110606Theobroma cacaoCDS
CDS-auto110607auto110607Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t015600.3 ID=Tc02v2_t015600.3|Name=Tc02v2_t015600.3|organism=Theobroma cacao|type=mRNA|length=1197bp
ATGGAAAATGCTTCAAAGAAATGGGTTTTTAAAGGAAACAAGGCACTGGA
AGCAGCGGATGCCATCTGCGTTCGAGGGGTTCTCAACATGTTAAATGATA
ATCTAAATGGAGATGATAACAAGCCTGCCATCCCTCTCGGCCACGGTGAT
CCCTCCGTGTTTCCGTGTTTTCGAACCACTGCTATAGCCGAAGATGCCAT
TGTTGAGGCTGTCCGATCAGCTAAGTTCAACTGCTATTCTCCAACCATCG
GTATTCTTCCAGCAAGGAGGGCTATAGCTGCATATCTGTCTCAAGATATT
TCATACCAATTATCTCCGGATGATGTTTATCTCACAGTTGGTTGCAATAA
CTCAATTGAGGTCATAATTTCTGTCCTTGCTAGTCCTAGTGCGAATATTC
TTCTTCCCAGGCCAGGGTACCCAATGTATGAATCTCGTGCTGCTTTTAGC
AACCTTGAAGTACGGCATTTTGATCTTGTACCAGAGAAAGGGTGGCAAGT
TGATCTTGATTCTGTTGAAGCTCTTGCAGATGAGAACACAGTAGCCATGG
TTATTGTTAACCCTGGCAATCCTTGTGGAAGTGTCTTTACCTGTCAACAC
TTGAAAAAGGTTGCTGAAACAGCAAAAAAGCTTGGAATATTTGTCATTGC
TGATGAGGTTTATGGCCATCTAACTTTTGGGAGCAACCCATTTGTGCCTA
TGGGGAAGTTTGGATCTATTGTGCCTGTTATTACACTCGGGTCTATATCG
AAGAGATGGATTGTTCCTGGTTGGCGTCTTGGCTGGATAGTGACATGTGA
TCCAAATGGCAGTCTTAAGAAATCTCGGGGGGCAATTCCTCAAATACTTG
AAAAAACAAAGGATGATTTCTTTGCCAAAATCCTTAAAATCTGTAGCCAA
GCTGCAGACATATGTTATGATAGACTTAAGGAGATTCCCTGCATAACTTG
TCCACACAAACCAGAGGGATCAATGTTTGTAATGGTAAAACTAAACGTGT
CACTACTTGAAGACATTGATGATGATATGGATTTCTGTCTCAAGTTGGCT
AGAGAGGAATCTGTGATTGTTCTTCCAGGGGTTGCAGTTGGGCTCAAAAA
TTGGCTGCGCATAACATTTGCTGTTGAACCGTCCACTCTTGAGGAAGGTC
TTGGAAGAATCAAAACCTTCTACAATAGGCACATGAAACAGCAATAA
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protein sequence of Tc02v2_p015600.3

>Tc02v2_p015600.3 ID=Tc02v2_p015600.3|Name=Tc02v2_p015600.3|organism=Theobroma cacao|type=polypeptide|length=399bp
MENASKKWVFKGNKALEAADAICVRGVLNMLNDNLNGDDNKPAIPLGHGD
PSVFPCFRTTAIAEDAIVEAVRSAKFNCYSPTIGILPARRAIAAYLSQDI
SYQLSPDDVYLTVGCNNSIEVIISVLASPSANILLPRPGYPMYESRAAFS
NLEVRHFDLVPEKGWQVDLDSVEALADENTVAMVIVNPGNPCGSVFTCQH
LKKVAETAKKLGIFVIADEVYGHLTFGSNPFVPMGKFGSIVPVITLGSIS
KRWIVPGWRLGWIVTCDPNGSLKKSRGAIPQILEKTKDDFFAKILKICSQ
AADICYDRLKEIPCITCPHKPEGSMFVMVKLNVSLLEDIDDDMDFCLKLA
REESVIVLPGVAVGLKNWLRITFAVEPSTLEEGLGRIKTFYNRHMKQQ*
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