Tc02v2_t015600.2

Overview
NameTc02v2_t015600.2
Unique NameTc02v2_t015600.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1101
Properties
Property NameValue
NoteTyrosine aminotransferase
Model evidenceSupporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Producttyrosine aminotransferase, transcript variant X3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608756
GenbankXM_018114499.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g015600Tc02v2_g015600Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p015600.2Tc02v2_p015600.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto110582auto110582Theobroma cacaoexon
exon-auto110583auto110583Theobroma cacaoexon
exon-auto110584auto110584Theobroma cacaoexon
exon-auto110585auto110585Theobroma cacaoexon
exon-auto110586auto110586Theobroma cacaoexon
exon-auto110587auto110587Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto110588auto110588Theobroma cacaoCDS
CDS-auto110589auto110589Theobroma cacaoCDS
CDS-auto110590auto110590Theobroma cacaoCDS
CDS-auto110591auto110591Theobroma cacaoCDS
CDS-auto110592auto110592Theobroma cacaoCDS
CDS-auto110593auto110593Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t015600.2 ID=Tc02v2_t015600.2|Name=Tc02v2_t015600.2|organism=Theobroma cacao|type=mRNA|length=1101bp
ATGGAAAATGCTTCAAAGAAATGGGTTTTTAAAGGAAACAAGGCACTGGA
AGCAGCGGATGCCATCTGCGTTCGAGGGGTTCTCAACATGTTAAATGATA
ATCTAAATGGAGATGATAACAAGCCTGCCATCCCTCTCGGCCACGGTGAT
CCCTCCGTGTTTCCGTGTTTTCGAACCACTGCTATAGCCGAAGATGCCAT
TGTTGAGGCTGTCCGATCAGCTAAGTTCAACTGCTATTCTCCAACCATCG
GTATTCTTCCAGCAAGGAGGGCTATAGCTGCATATCTGTCTCAAGATATT
TCATACCAATTATCTCCGGATGATGTTTATCTCACAGTTGGTTGCAATAA
CTCAATTGAGGTCATAATTTCTGTCCTTGCTAGTCCTAGTGCGAATATTC
TTCTTCCCAGGCCAGGGTACCCAATGTATGAATCTCGTGCTGCTTTTAGC
AACCTTGAAGTACGGCATTTTGATCTTGTACCAGAGAAAGGGTGGCAAGT
TGATCTTGATTCTGTTGAAGCTCTTGCAGATGAGAACACAGTAGCCATGG
TTATTGTTAACCCTGGCAATCCTTGTGGAAGTGTCTTTACCTGTCAACAC
TTGAAAAAGGTTGCTGAAACAGCAAAAAAGCTTGGAATATTTGTCATTGC
TGATGAGGTTTATGGCCATCTAACTTTTGGGAGCAACCCATTTGTGCCTA
TGGGGAAGTTTGGATCTATTGTGCCTGTTATTACACTCGGGTCTATATCG
AAGAGATGGATTGTTCCTGGTTGGCGTCTTGGCTGGATAGTGACATGTGA
TCCAAATGGCAGTCTTAAGAAATCTCGGATTGCAGAAAGCATTAGGAGAT
ATCTCAACATCTCCGCTGACCCACCAACAGTCATCCAGGTAAAACTAAAC
GTGTCACTACTTGAAGACATTGATGATGATATGGATTTCTGTCTCAAGTT
GGCTAGAGAGGAATCTGTGATTGTTCTTCCAGGGGTTGCAGTTGGGCTCA
AAAATTGGCTGCGCATAACATTTGCTGTTGAACCGTCCACTCTTGAGGAA
GGTCTTGGAAGAATCAAAACCTTCTACAATAGGCACATGAAACAGCAATA
A
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protein sequence of Tc02v2_p015600.2

>Tc02v2_p015600.2 ID=Tc02v2_p015600.2|Name=Tc02v2_p015600.2|organism=Theobroma cacao|type=polypeptide|length=367bp
MENASKKWVFKGNKALEAADAICVRGVLNMLNDNLNGDDNKPAIPLGHGD
PSVFPCFRTTAIAEDAIVEAVRSAKFNCYSPTIGILPARRAIAAYLSQDI
SYQLSPDDVYLTVGCNNSIEVIISVLASPSANILLPRPGYPMYESRAAFS
NLEVRHFDLVPEKGWQVDLDSVEALADENTVAMVIVNPGNPCGSVFTCQH
LKKVAETAKKLGIFVIADEVYGHLTFGSNPFVPMGKFGSIVPVITLGSIS
KRWIVPGWRLGWIVTCDPNGSLKKSRIAESIRRYLNISADPPTVIQVKLN
VSLLEDIDDDMDFCLKLAREESVIVLPGVAVGLKNWLRITFAVEPSTLEE
GLGRIKTFYNRHMKQQ*
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