|
|
Properties
| Property Name | Value |
|---|
| Note | Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 2 |
| Model evidence | Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns |
| Product | probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 2, transcript variant X10 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t015390.10 ID=Tc02v2_t015390.10|Name=Tc02v2_t015390.10|organism=Theobroma cacao|type=mRNA|length=1836bp
ATGAGTGCGGCTGGAAAACGGCCACGCCAGATCCTCAAGGCGTTAAGGCA
AAGAAATCCAAATCTTGTATCGGATTCAAGGAATGTTTACAATGTCAAAG
CTAAGATCCGTCGAGGGAGTTTATCAGGTGAGGACATTCAAGAAAAAAAA
GCTACAAATTTGACCCTACTAATTAAACCTCCAGTTTCTTTAGAAGGCAA
GAAAGCGGAGGTGTCGTGTTCATCATCGACGGAGACGATGAACACCAATG
GTGTTGCAGCGACAGTGACACAGGCTCAGCCAATGGTGCATAACAGCTTT
GCAATGTCACAGGCGTACGTGGAGAGCAAAGAAGTGACTGAGACAAAAGC
TTTAGTGGCAGAGCTGTGCCAACATTTTTATACGCTTGGTTGGCTTGCGG
GTACTGGGGGGAGCATCACTATTAGGGTGCATGACGGCTCCATTCCTAGA
CACCATCAGCTCATCGTCATGTCTCCTTCTGGTGTTCAGATGGAGAGAAT
GGTAGCGGAGGGTATGTATGTGTTATCTTCAGATGGATTTATAATGTCAA
CACCTCCTTTGAAGCTGTATCCCTATCAACCTCCAAAGTGCACCGACTGT
GCTCCTCTCTTCATGAAGGTTTATGAAATCTGTAATGCTGGGGCTGTTGT
CCACAGTCATGGACTGGAGGCTTGTCTTGTTACAATGATCAATCCTTTCT
CAAAGGAGTTCCGAATTACTCATATGGAAATGATAAAAGGAATTCAAGGC
CATGGTTATCATGATGAACTTGTGGTCCCAATAATTGAGAACACTGCCCA
TGAAGGAGAGCTCACAGAATCTCTTACAGAAGCGATGAGAGCATATCCAA
AAACAACAGCCGTACTTGTTCGCAACCACGGAGTGTATATATGGGGAGAT
TCATGGATCAGCACCAAAACTCAGGCTGAATGCTATCATTATCTTTTTGA
TGCTGCTATCAAGCTTCATCAGTTGGGGCTGGACTGGTCCAGTCCAAATC
ATGGTCCCCTACGCAATGTAAATGGACTTTGGGGATGTGCTGGGAATTCC
AGTAGGGGTCCAAAGGTGGGAACTTTTGGTCTGGATTACATGATTGAGCC
TTCTCAGCGTTGTCTACTCCTTACTGTTGAAGGGACAGTGACCCCTATGT
CATTCGTGACTGATATTCTCTTTCCCTATGCCCATGATAATGTGCGAAAA
CATTTAGCAATGACATATGACACTGAAGAAACTCAGCATGATATTGACCT
GCTGCGCTCCCAAATACAGGAGGATCTGGAACAAGGTGTTGCTGGAGCTG
TGCCTATACCTCCAGATTATGTTGGGAAAGAGCTAGTGATTGCTTCCTTG
GCTGCTAATGTTGAAGCTATGATTAACACTGACAGGAAGGTCACTTCCCT
AAAACAACTAGAAGGTCGTATATGGAGAACTGGATTTCAAAGCAATGAGT
TGGTTGCTGTTGTATTCGAGGACGTACCTGAAGCTCTTGAGAAGTGGCAT
GCTTCAGGCATCAAGGTGTACATATTCGCATGTGGTAGCAGGGAAGTACA
ACAACTTTTGTTTGCTAACTCTAACTATGGGGACTTGAGAAAATACTTGT
GTGGGTTTTTTGATACCACAGTGGGAAACAAACAAGTCGCGCATAGTTAT
TTTGAGATTTTGCAAACTGTGGGAGTTGATAGACCAGCAGACATGTTATT
TGTAACAGATCGCTTTCAGGAAGCTGAGGCAGCCAGGGCTGCAGGTTTGG
AAGTGATAATCTCCATCCGTCCAGGAAATGGACCTCTCCCGCAGAATCAT
GGGTTTAGAACAATTGCATCCTTGTTGGAAATATAA back to topprotein sequence of Tc02v2_p015390.10 >Tc02v2_p015390.10 ID=Tc02v2_p015390.10|Name=Tc02v2_p015390.10|organism=Theobroma cacao|type=polypeptide|length=612bp
MSAAGKRPRQILKALRQRNPNLVSDSRNVYNVKAKIRRGSLSGEDIQEKK
ATNLTLLIKPPVSLEGKKAEVSCSSSTETMNTNGVAATVTQAQPMVHNSF
AMSQAYVESKEVTETKALVAELCQHFYTLGWLAGTGGSITIRVHDGSIPR
HHQLIVMSPSGVQMERMVAEGMYVLSSDGFIMSTPPLKLYPYQPPKCTDC
APLFMKVYEICNAGAVVHSHGLEACLVTMINPFSKEFRITHMEMIKGIQG
HGYHDELVVPIIENTAHEGELTESLTEAMRAYPKTTAVLVRNHGVYIWGD
SWISTKTQAECYHYLFDAAIKLHQLGLDWSSPNHGPLRNVNGLWGCAGNS
SRGPKVGTFGLDYMIEPSQRCLLLTVEGTVTPMSFVTDILFPYAHDNVRK
HLAMTYDTEETQHDIDLLRSQIQEDLEQGVAGAVPIPPDYVGKELVIASL
AANVEAMINTDRKVTSLKQLEGRIWRTGFQSNELVAVVFEDVPEALEKWH
ASGIKVYIFACGSREVQQLLFANSNYGDLRKYLCGFFDTTVGNKQVAHSY
FEILQTVGVDRPADMLFVTDRFQEAEAARAAGLEVIISIRPGNGPLPQNH
GFRTIASLLEI* back to top
|