Tc02v2_t014840.1

Overview
NameTc02v2_t014840.1
Unique NameTc02v2_t014840.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length519
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productphotosystem II repair protein PSB27-H1, chloroplastic
NotePhotosystem II family protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608668
GenbankXM_007043475.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g014840Tc02v2_g014840Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p014840.1Tc02v2_p014840.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto109049auto109049Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto109050auto109050Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t014840.1 ID=Tc02v2_t014840.1|Name=Tc02v2_t014840.1|organism=Theobroma cacao|type=mRNA|length=519bp
ATGGCCTCTCCAACGCTGTTAACCCCAACTTCCAAGCTCAAACCTCTCCT
TCCCATCAAAGCTAAAGCCGCCTCAGCCGCACAACCACATCCGCCACCAC
AACAACAACCTTTAAGGCGCCAATTCTTGACCCTGGCTGCCACCACCACC
ACAACTCTGTCGCTTGCGGGGATTCTGCCAGTGACAGCAGCATTTGCTGC
CTCGGATGAGGAGTACGTGAAAGAGACTGAAGTAGTGATCAACAAAGTGA
GAAGCACCATCAATATGGACAAGAACGATCCCAACGTTGCTGCCGCTGTG
GCTGAACTTAGAGAGACATCAAATTCTTGGGTGGCAAAGTACAGAAGAGA
GAAAGCCTTGCTTGGTAGAGCTTCTTTCCGTGATATTTACTCAGCATTGA
ATGCTGTTTCTGGTCATTACATTAGCTTTGGACCGACTGCCCCAATCCCA
GCAAAGAGAAAGGCTAGGATTCTTGAAGAGATGGACACTGCAGAGAAAGC
ATTATTGCGAGGAAGATAA
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protein sequence of Tc02v2_p014840.1

>Tc02v2_p014840.1 ID=Tc02v2_p014840.1|Name=Tc02v2_p014840.1|organism=Theobroma cacao|type=polypeptide|length=173bp
MASPTLLTPTSKLKPLLPIKAKAASAAQPHPPPQQQPLRRQFLTLAATTT
TTLSLAGILPVTAAFAASDEEYVKETEVVINKVRSTINMDKNDPNVAAAV
AELRETSNSWVAKYRREKALLGRASFRDIYSALNAVSGHYISFGPTAPIP
AKRKARILEEMDTAEKALLRGR*
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