Tc02v2_t014390.3

Overview
NameTc02v2_t014390.3
Unique NameTc02v2_t014390.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1467
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
Productdiacylglycerol kinase 5, transcript variant X3
NoteDiacylglycerol kinase 5
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608614
GenbankXM_007043402.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g014390Tc02v2_g014390Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p014390.3Tc02v2_p014390.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto108380auto108380Theobroma cacaoexon
exon-auto108381auto108381Theobroma cacaoexon
exon-auto108382auto108382Theobroma cacaoexon
exon-auto108383auto108383Theobroma cacaoexon
exon-auto108384auto108384Theobroma cacaoexon
exon-auto108385auto108385Theobroma cacaoexon
exon-auto108386auto108386Theobroma cacaoexon
exon-auto108387auto108387Theobroma cacaoexon
exon-auto108388auto108388Theobroma cacaoexon
exon-auto108389auto108389Theobroma cacaoexon
exon-auto108390auto108390Theobroma cacaoexon
exon-auto108391auto108391Theobroma cacaoexon
exon-auto108392auto108392Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto108393auto108393Theobroma cacaoCDS
CDS-auto108394auto108394Theobroma cacaoCDS
CDS-auto108395auto108395Theobroma cacaoCDS
CDS-auto108396auto108396Theobroma cacaoCDS
CDS-auto108397auto108397Theobroma cacaoCDS
CDS-auto108398auto108398Theobroma cacaoCDS
CDS-auto108399auto108399Theobroma cacaoCDS
CDS-auto108400auto108400Theobroma cacaoCDS
CDS-auto108401auto108401Theobroma cacaoCDS
CDS-auto108402auto108402Theobroma cacaoCDS
CDS-auto108403auto108403Theobroma cacaoCDS
CDS-auto108404auto108404Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t014390.3 ID=Tc02v2_t014390.3|Name=Tc02v2_t014390.3|organism=Theobroma cacao|type=mRNA|length=1467bp
ATGGCGGAATCTAACTCTGAGTCCGACTTCTTGAAGAAATTCTACATCCC
TACATATATATTCATTGATGAAACAAAAATCTCTGATGTTCCCGATGCAC
CTGAATTTCCAGTGCTAGTTTTTATCAACTCCAAAAGTGGCGGTCAGTTA
GGTGGGGATCTTCTTAAAACATATAAAACTGTCCTCAATGAACATCAGGT
TTTCGATGTGGAGGAAGAGGCTCCTGATAAGGTGCTTCGTAGAGTTTACA
TCAGACTAGAAAAGCTGAAACAAGAAAACGATGAATTTGCCACAAAGATT
CATGAGAACTTAAGAATAATTGTTGCTGGTGGTGATGGGACAGCTGGCTG
GCTTCTGGGGGTCGTCTGTGATCTTAAATTGCAGCATCCACCTCCAATTG
CTACAGTTCCTTTGGGAACTGGTAACAATCTGCCATTTTCGTTTGGCTGG
GGAAAGAAGAATCCTGGGACTGATCGTAATTCTGTAGTGTCATTCTTGGA
ACAAGTAATGAAAGCAAAGGAAATGAAAATAGACAATTGGCATATTCTCA
TGAGGATGAGAGCTCCAAAGGAAGGTTCCTGTGATCCTATTCCACCTCTT
GAGCTACCACATTCTTTACATGCATTCGGTCGTGTCTCATCAACAGATGA
ACTCAACATGGAAGGTTACCACACATTTCGTGGGGGGTTATGGAATTACT
TCAGCATGGGAATGGACGCTCAAGTATCTTATGCTTTTCACTCTGAGCGA
AAGCTGCATCCAGAAAAATTCAAAAACCAGTTGGTTAATCAGAGCACCTA
TGCAAAGCTTGGTTGTACACAAGGGTGGTTTGCCGCTTCTATGTTTCATC
CTTCTTCAAGGAATGTTGCTCAGCTTGCGAAAGTGAAAATCATGAAAAGA
CATGGTCAATGGCAAGACCTCCACATACCACACAGCATAAGGTCAATCGT
GTGTCTCAACTTGCCCAGCTTTTCTGGTGGTCTAAATCCTTGGGGAACGC
CAAGTGGCAGAAAACTGCGAGATAGAGACTTCACTCCACCTTATGTAGAT
GATGGCCTTCTGGAAGTTGTTGGTTTTAGAGATGCTTGGCATGGGCTTGT
GTTGCTGGCTCCAAATGGACATGGAACTCGTCTGGCACAGGCACACCGAA
TCCGCTTTGAGTTTCACAAAGGAGCTGCTGACTATACATATATGAGGATT
GATGGGGAACCCTGGAAGCAACCACTGCCAAATGATGATGATACTGTTGT
GGTTGAAATTTCTCACCTTGGACAAGTCAACATGCTTGCAACCCACAATT
GCCGGTCTAAAAGTGTCCGTGATCCCTCATCAACCAGTCATCACAACGGC
GAGGAAAATGGTAGTGATGAAGAAGACTCCAGAAATGAGGCAGACGGTTT
TGGGAAATTTGGGGCAGCGGACACGTTCAAGATCCCAGATGAGGTTGATA
TTTCTCAACTTAGTTAG
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protein sequence of Tc02v2_p014390.3

>Tc02v2_p014390.3 ID=Tc02v2_p014390.3|Name=Tc02v2_p014390.3|organism=Theobroma cacao|type=polypeptide|length=489bp
MAESNSESDFLKKFYIPTYIFIDETKISDVPDAPEFPVLVFINSKSGGQL
GGDLLKTYKTVLNEHQVFDVEEEAPDKVLRRVYIRLEKLKQENDEFATKI
HENLRIIVAGGDGTAGWLLGVVCDLKLQHPPPIATVPLGTGNNLPFSFGW
GKKNPGTDRNSVVSFLEQVMKAKEMKIDNWHILMRMRAPKEGSCDPIPPL
ELPHSLHAFGRVSSTDELNMEGYHTFRGGLWNYFSMGMDAQVSYAFHSER
KLHPEKFKNQLVNQSTYAKLGCTQGWFAASMFHPSSRNVAQLAKVKIMKR
HGQWQDLHIPHSIRSIVCLNLPSFSGGLNPWGTPSGRKLRDRDFTPPYVD
DGLLEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFEFHKGAADYTYMRI
DGEPWKQPLPNDDDTVVVEISHLGQVNMLATHNCRSKSVRDPSSTSHHNG
EENGSDEEDSRNEADGFGKFGAADTFKIPDEVDISQLS*
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