Tc02v2_t013080.2

Overview
NameTc02v2_t013080.2
Unique NameTc02v2_t013080.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length594
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productprotein-S-isoprenylcysteine O-methyltransferase B, transcript variant X3
NoteProtein-S-isoprenylcysteine O-methyltransferase B
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608459
GenbankXM_018115817.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g013080Tc02v2_g013080Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p013080.2Tc02v2_p013080.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto105526auto105526Theobroma cacaoexon
exon-auto105527auto105527Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto105528auto105528Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t013080.2 ID=Tc02v2_t013080.2|Name=Tc02v2_t013080.2|organism=Theobroma cacao|type=mRNA|length=594bp
ATGACAGAAACTTTAAGTTATACAGCCTGCAGACAGTTATCTCAGATGTT
CTTGGCAATAATTTTCTTTCATAGTTCAGAATACATCCTAGCAATTGCCA
TTCATGGGAGATCAAATGTTACTTTCAAATCATTTCTCATCAGCAAAAAT
TATCTTTCTGCTATGATCCTTTCATTGCTGGAGTACTTCCTTGAAATTGT
TCTATTTCCTGGGTTGAAGGAACACTGGTGGATAAGTGACACAGGTCTTG
CAATGGTGGTAATAGGGGAGATTATACGAAAGTTGGCAATTATAACTGCT
GGTCAAGCCTTCACGCATCTTATCAAGGTTTACCACGAGGAGCATCATCA
ACTAATTACTCACGGAGTCTATAGATTTGTCCGTCATCCAGGGTACTCTG
GTTTCCTCATTTGGTCAGTTGGCACTCAGATAATGCTCTGCAATCCCATA
TCCACAATCGCTTTTGCAATTGTTGTTTGGCAATTCTTTGCAGAAAGAAT
ACCTTATGAAGAGTTTTTCTTAAAGCAGTTTTTTGGGTCAGACTATGAGG
ATTATGCACTTCGGGTCCCTTCTGGGGTGCCATTTGTAAAATGA
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protein sequence of Tc02v2_p013080.2

>Tc02v2_p013080.2 ID=Tc02v2_p013080.2|Name=Tc02v2_p013080.2|organism=Theobroma cacao|type=polypeptide|length=198bp
MTETLSYTACRQLSQMFLAIIFFHSSEYILAIAIHGRSNVTFKSFLISKN
YLSAMILSLLEYFLEIVLFPGLKEHWWISDTGLAMVVIGEIIRKLAIITA
GQAFTHLIKVYHEEHHQLITHGVYRFVRHPGYSGFLIWSVGTQIMLCNPI
STIAFAIVVWQFFAERIPYEEFFLKQFFGSDYEDYALRVPSGVPFVK*
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