|
Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns |
Product | exopolygalacturonase, transcript variant X1 |
Note | Putative Exopolygalacturonase (Fragment) |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t012330.1 ID=Tc02v2_t012330.1|Name=Tc02v2_t012330.1|organism=Theobroma cacao|type=mRNA|length=1290bp ATGAGCCTTGATACTCACACCAAGTTGCTATTGGTGCTTTCATTGTTTTG TTTCAATGTTGTTTTTGCTGGGGAAAGTGGAGCAAGAAGTGCAGATTTAG GAATGGAAGGCTTTGAACAACATGGAAGGGGGCTTGGGTTATCACATTAC AAGGGAAGGAGCTCTCATTTATTCAATGTCAAGAGCTTTGGTGCTCGGGC CGATGGACTGACTGATGACAGCAAAGCCTTCAGAGCAGCATGGAAGAAAG CATGTCAGGCTACAGGTGAGGTAGACCTTGTGATTCCAAGAGGGACATAC TTGGTTGGCCCTGTCAAATTCGCAGGCCCCTGCACAAATGTGTCTAAAAT AACAGTTCGTGTGAAGGGTTATCTGAAGGCAACAACAAACTTGTCTCAAT ATGGATATAGTGCTGGTTGGGTTGAATTCAAATGGGTGGAGGGGCTAATT TTGACTGGAGGAGGGACTTTTGATGGGCAGGGTGCCAAAGCATGGCCTTA CAATAGGTGCCCCACTGACTTTAACTGCAAACTTCTTCCAACTAATGTCA AATTTGTGGGGACGAATAGGACGGTTGTAAGAAGCATAACTTCAGTAAAT AGCAAGTTCTTTCATATGGCTCTTGTCGAATGCAAGAACTTCAAGGGCAG TAAAATCAAGATTTCAGCCCCAGCAGATAGCCCTAACACAGATGGGATCC ATATCGAACGAAGCTCTAGCGTACACTTTTCACGATCACTTATAGGTACA GGTGATGACTGCATATCTATTGGACAAGGAAATTCTCAGGTCACCATCAC AAGCATCAGCTGCGGGCCAGGTCATGGCATCAGCGTTGGAAGTCTGGGAA GATATAGGAATGAAGGTGATGTAAGTGGATTAGTGGTTAGAGACTGCACA ATTACAGGGACCACGAATGGGATTAGGATCAAGACATGGGCTAACTCTCC AGACAGAAGTGCTGCCACCAATATGACATTCGAAAACATCAACATGAACA ATGTGACCAATCCGATTATAATCGATCAGGCATATTGTCCATTCACATCT TGCACCCCAATGGGAACATCTCAAGTGAAACTAAGTGACATATATTTCAA GAAAATAAAGGGAACATCATCATCTGCAGTGGCGGTAACACTAGAATGTA GCAAAGGGATCCCATGCCAGGATATTTACCTTGAAGATGTTCACTTGGAC CTGGCATCAGGGGAGAAACAAGCGACTTCCACTTGTAAAAATGTCAGGGC TAAATACATTGGCACCCAAATCCCACCACCATGTGCTTAG back to topprotein sequence of Tc02v2_p012330.1 >Tc02v2_p012330.1 ID=Tc02v2_p012330.1|Name=Tc02v2_p012330.1|organism=Theobroma cacao|type=polypeptide|length=430bp
MSLDTHTKLLLVLSLFCFNVVFAGESGARSADLGMEGFEQHGRGLGLSHY KGRSSHLFNVKSFGARADGLTDDSKAFRAAWKKACQATGEVDLVIPRGTY LVGPVKFAGPCTNVSKITVRVKGYLKATTNLSQYGYSAGWVEFKWVEGLI LTGGGTFDGQGAKAWPYNRCPTDFNCKLLPTNVKFVGTNRTVVRSITSVN SKFFHMALVECKNFKGSKIKISAPADSPNTDGIHIERSSSVHFSRSLIGT GDDCISIGQGNSQVTITSISCGPGHGISVGSLGRYRNEGDVSGLVVRDCT ITGTTNGIRIKTWANSPDRSAATNMTFENINMNNVTNPIIIDQAYCPFTS CTPMGTSQVKLSDIYFKKIKGTSSSAVAVTLECSKGIPCQDIYLEDVHLD LASGEKQATSTCKNVRAKYIGTQIPPPCA* back to top
|