Tc02v2_t012230.1

Overview
NameTc02v2_t012230.1
Unique NameTc02v2_t012230.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1092
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Producthomoserine kinase
NoteHomoserine kinase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608368
GenbankXM_007043016.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g012230Tc02v2_g012230Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p012230.1Tc02v2_p012230.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto103567auto103567Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto103568auto103568Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t012230.1 ID=Tc02v2_t012230.1|Name=Tc02v2_t012230.1|organism=Theobroma cacao|type=mRNA|length=1092bp
ATGGCAATCTGCTTTCAATTTCAATCCCCTCTAAAACCCATCAACATCCC
TCCATCATCAACCAAAAAAGCCCCCATCTTTAGATGCAAAGCCTCTTTTT
CCACCACCATCACCACAGAGCCCGAGCCCGTCTTCACCTCCGTGAAGTCC
TTCGCCCCGGCCACGGTCGCCAATCTCGGCCCAGGCTTCGACTTCCTCGG
CGCCGCCGTCGACGGCCTTGGCGACTTCGTCTCCGTTAGCCTCGACACCT
CTGTCCGTCCAGGTCATGTGTCGATCTCGGAAATCTCCGGTTCTTCTAAA
CTCTCCTCCAATCCTCTCTTCAACTGCGCAGGCATCGCGGCCATCGCCGC
CATGAAAATGCTCAATATTCGCTCCTTCGGCATTTCCCTCAAACTCGAAA
AAGGCTTACCTTTAGGAAGCGGCCTTGGTTCCAGCGCAGCTTCCGCCGCT
GCAGCCGCCGTGGCGGTCAACGAACTTTTCGGCGCCAAACTCGGAGCTGA
CCAGCTGATTCTCGCCGGATTAGAATCCGAAGCAAAAGTGTCCGGTTATC
ACGCCGATAATATCGCTCCGGCAGTCATGGGAGGTTTCGTTCTAATCAAA
AGCTACGAACCTCTAGAATTAAAACCCTTAATTTTCCCCAATAATCAGGA
ACTGTTTTTCATATTAGTTAGCCCGGAATTCGAGGCCCCCACCAAGAAAA
TGCGGGCGGCTCTGCCCGCGGAAATCGGGATGCCGCAACACGTGTGGAAT
TGTAGCCAAGCGGGTGCATTGGTGGCTTCGGTGTTGGAGGGTGACGTGGC
GGGGTTGGGGAAGGCGTTGTCGTCGGACAAGATCGTGGAACCGAAACGTG
CGCCGTTGATTCCGGGGATGGAAGGGGTCAAGAAGGCTGCGATCGAAACC
GGTGCTTTTGGGTGTACGATTAGTGGGGCGGGGCCGACGGCTGTGGCTGT
GATTGATAATGAAGACAAAGGGAAGGTGATCGGGGAAAAGATGGTGGAGG
CGTTTTTAAAAGAAGGGAATTTGAGGTCGGTGTCTATGGTTAAAAGACTC
GATAGAGTTGGTGCTAGGCTTGTCGACAGTTTTCCCAGATGA
back to top

protein sequence of Tc02v2_p012230.1

>Tc02v2_p012230.1 ID=Tc02v2_p012230.1|Name=Tc02v2_p012230.1|organism=Theobroma cacao|type=polypeptide|length=364bp
MAICFQFQSPLKPINIPPSSTKKAPIFRCKASFSTTITTEPEPVFTSVKS
FAPATVANLGPGFDFLGAAVDGLGDFVSVSLDTSVRPGHVSISEISGSSK
LSSNPLFNCAGIAAIAAMKMLNIRSFGISLKLEKGLPLGSGLGSSAASAA
AAAVAVNELFGAKLGADQLILAGLESEAKVSGYHADNIAPAVMGGFVLIK
SYEPLELKPLIFPNNQELFFILVSPEFEAPTKKMRAALPAEIGMPQHVWN
CSQAGALVASVLEGDVAGLGKALSSDKIVEPKRAPLIPGMEGVKKAAIET
GAFGCTISGAGPTAVAVIDNEDKGKVIGEKMVEAFLKEGNLRSVSMVKRL
DRVGARLVDSFPR*
back to top