Tc02v2_t012100.1

Overview
NameTc02v2_t012100.1
Unique NameTc02v2_t012100.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length909
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
Productdehydrodolichyl diphosphate synthase 6
NoteDehydrodolichyl diphosphate synthase 6
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608352
GenbankXM_018115167.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g012100Tc02v2_g012100Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p012100.1Tc02v2_p012100.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto103249auto103249Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto103250auto103250Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t012100.1 ID=Tc02v2_t012100.1|Name=Tc02v2_t012100.1|organism=Theobroma cacao|type=mRNA|length=909bp
ATGGAGAAAGAAGTTATTCCAAGAAAAATCTTGTCTGGATGGATAAGGTT
CGTTAGAAAATGTTTCTTTCGAGTTCTCAGAGTTGGTCCAATCCCCTCTC
ATATTGCTGTCATTATGGATGGAAACCGAAGATATGCCAAAAAGAAGAAG
CTAGAAGAAGGGGCAGGTCATGATGCAGGGGCTTTGGCTCTCTTGTGCTT
GCTTATTTATTGCTACGAGCTTGGCGTGAAACATCTGTCTGCTTATGCCT
TCAGCATCGATAATTTCAGAAGAAAGCCAGAGGAAGTTCAAAAAATTATG
GATTTGTTGAGGGAATGTATTCCTCTCTTGACTAGGATAGTGAAGCATCG
TCCAATCAGAGTTCATTTTGCAGGAAGCTTAGAACTCTTGAGTGCAGATA
TTAGAATTCCAGCCAAGAGACTTATGGACGCTACTGCTGATAACTCTAAA
TTTATCTTCACACTTTGTGTTGTCTACACTTCCACCGACGAGATCATGCA
TGTAGTTCAAGAATCTTGTAAAGAAAAATGTGATCATATTCCAGAAATCA
GGGCAAATGATGCTAACAACGGTTTCCTGGGTGAGAATGAAGATAGTCAT
CTGGGTGATCAAGACCTTATAAAGTTAGTAGATATTGAAAAGCACATGTA
TATGGCCATTACACCAGATCCTGACATTTTGATCCGCACAGGGGACGAGC
ACCGCCTAAGCAACTTCCTTCTATGGCAGACTTCTGGCTGCCAGTTGTCC
TCCTTGGTCACACTTTGGCCGGAGATTGGCATCTGGCAACTGGTGTGGGT
GGTCTTGAATTTTCAGCGAAACCACCATTATTATGGGAGGAAAAGAAATG
CAGCTGTAGACCTTGTAAATGGTTCATACTCTTCGTCATCTCCACCTAGT
AAATCATAG
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protein sequence of Tc02v2_p012100.1

>Tc02v2_p012100.1 ID=Tc02v2_p012100.1|Name=Tc02v2_p012100.1|organism=Theobroma cacao|type=polypeptide|length=303bp
MEKEVIPRKILSGWIRFVRKCFFRVLRVGPIPSHIAVIMDGNRRYAKKKK
LEEGAGHDAGALALLCLLIYCYELGVKHLSAYAFSIDNFRRKPEEVQKIM
DLLRECIPLLTRIVKHRPIRVHFAGSLELLSADIRIPAKRLMDATADNSK
FIFTLCVVYTSTDEIMHVVQESCKEKCDHIPEIRANDANNGFLGENEDSH
LGDQDLIKLVDIEKHMYMAITPDPDILIRTGDEHRLSNFLLWQTSGCQLS
SLVTLWPEIGIWQLVWVVLNFQRNHHYYGRKRNAAVDLVNGSYSSSSPPS
KS*
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