Tc02v2_t012080.1

Overview
NameTc02v2_t012080.1
Unique NameTc02v2_t012080.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length882
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Productdehydrodolichyl diphosphate synthase 6
NoteDehydrodolichyl diphosphate synthase 6
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608350
GenbankXM_007042988.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g012080Tc02v2_g012080Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p012080.1Tc02v2_p012080.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto103239auto103239Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto103240auto103240Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t012080.1 ID=Tc02v2_t012080.1|Name=Tc02v2_t012080.1|organism=Theobroma cacao|type=mRNA|length=882bp
ATGACCCTGCATATGGAGAAAGGTGGAATAAGTATATCAGCAAGACGGTT
CCTCTGGAAACTGAGCTACTTACAACGAAAATGCATATTCTCTGTTCTTT
CTGTTGGTAGACTCCCTACTCACATTTCCTTCATAATGGATGGAAATAGA
AGATATGGAGAGCAGCGAAACCTTAAAGAGGGGGCAGGACACAAAGCTGG
GTATTTGGCCCTCATGCTCATGGTTATTTACTGCTGTGAACTGGGGATAA
AATATATAACAGCCTACGCCTTCAGCATCGATAATTTCAAGCGTGGGCCT
GACAAAGTTCAATATATCATGGATCTGATGCTGGAGAAGATCGAACTAGA
ATTAAGTAAAAAAGATAGCTTATTTAGCCGCTATGGAGTCAAGGTTCATT
TCTCAGGGAACATGGAACTCTTAAGCGACCCCATTAAGGATGCAGCCAAG
AGACTGATGGTGGCTACCGCCAACAACTCTAATACTTTGCTCACAGTCTG
CTTTGCCTACACTTCCAGGAATGAAATCCTACATGCTATTCAAGAAACTT
GTCAAGAAAAGCTGGCTCAGATTCAACTTCAGGAGTCGATTTCAGAAGGG
AGGATCAGCATGTGTAATCCGGGGCAGGGCAACCACGTTTTAAAGTTAGC
AGATATTGAGAAGCACATGTACATGGCAATTGCACCTGATCCTGACATTA
TAATTCGTACTTCAGGTGAAAATCGGCTGAGTAATTTCCTGCTGTGGCAA
AGTGCTAATAGCTGTTTGATTTCTTTCTCTCAGCTTTGGCCTGGGATTAG
TTGTTGGCATCTGGTTTGGGCGGTTTTGAACTTCCAGCGAAACCACTATT
ATTTGGAGAAGAAAAAAAAGAAGCAAATATGA
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protein sequence of Tc02v2_p012080.1

>Tc02v2_p012080.1 ID=Tc02v2_p012080.1|Name=Tc02v2_p012080.1|organism=Theobroma cacao|type=polypeptide|length=294bp
MTLHMEKGGISISARRFLWKLSYLQRKCIFSVLSVGRLPTHISFIMDGNR
RYGEQRNLKEGAGHKAGYLALMLMVIYCCELGIKYITAYAFSIDNFKRGP
DKVQYIMDLMLEKIELELSKKDSLFSRYGVKVHFSGNMELLSDPIKDAAK
RLMVATANNSNTLLTVCFAYTSRNEILHAIQETCQEKLAQIQLQESISEG
RISMCNPGQGNHVLKLADIEKHMYMAIAPDPDIIIRTSGENRLSNFLLWQ
SANSCLISFSQLWPGISCWHLVWAVLNFQRNHYYLEKKKKKQI*
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