Tc02v2_t011910.3

Overview
NameTc02v2_t011910.3
Unique NameTc02v2_t011910.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1362
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Productaminotransferase ALD1, transcript variant X2
NoteAminotransferase ALD1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608332
GenbankXM_007042961.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g011910Tc02v2_g011910Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p011910.3Tc02v2_p011910.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto102903auto102903Theobroma cacaoexon
exon-auto102904auto102904Theobroma cacaoexon
exon-auto102905auto102905Theobroma cacaoexon
exon-auto102906auto102906Theobroma cacaoexon
exon-auto102907auto102907Theobroma cacaoexon
exon-auto102908auto102908Theobroma cacaoexon
exon-auto102909auto102909Theobroma cacaoexon
exon-auto102910auto102910Theobroma cacaoexon
exon-auto102911auto102911Theobroma cacaoexon
exon-auto102912auto102912Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto102913auto102913Theobroma cacaoCDS
CDS-auto102914auto102914Theobroma cacaoCDS
CDS-auto102915auto102915Theobroma cacaoCDS
CDS-auto102916auto102916Theobroma cacaoCDS
CDS-auto102917auto102917Theobroma cacaoCDS
CDS-auto102918auto102918Theobroma cacaoCDS
CDS-auto102919auto102919Theobroma cacaoCDS
CDS-auto102920auto102920Theobroma cacaoCDS
CDS-auto102921auto102921Theobroma cacaoCDS
CDS-auto102922auto102922Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t011910.3 ID=Tc02v2_t011910.3|Name=Tc02v2_t011910.3|organism=Theobroma cacao|type=mRNA|length=1362bp
ATGTACAAGCTATTAGCTTGCTGCTCTATGGCCTCTGGAATTTCCTTGCA
GCCTAAGATGGTCCAGGCCAGTTTGGGAGTTCAAAAGCAGGGAAATGGTC
ATTGCACAAATGTGCCCCGCAATGTAAACTTGGAAAAGCTGCAAAATAAC
TATTTGTTTCCTGAGATTTCAAAGCGGGAGCTCCAGCACCTGGATAAGTA
CCCAAGTGCAAAAGTGATTAGCCTTGGGATTGGTGATACCACTGAGCCCA
TTCCTGAGAAAATTAGCCTTAGCATGGCTAATTATGCACATGCCCTTTCA
ACTGCTGAAGGTTATAGAGGGTATGGAGCTGAGCAAGGGAATCAGGTATT
GAGGAAAGCAATTGCAGAAACATTCTACAAAAATGTACTGATAAGAGACC
AGGAAGTTTTTGTATCAGATGGTTCTCAGTGTGATATTTCCCGCCTTCAG
CTGCTTCTAGGTTCAAAAGTGACAATAGCCGTGCAGGATCCATCTTTTCC
GGCTTATATAGATTCAAGTGTTATTATCGGCCAGGCTGGTGATTTTCAAG
ACAAAACTGGGAAGTACCAGAACATTGTATACATGCAGTGTGGACCTGAA
AATAATTTTTTCCCTGATTTAACAACCACTCCAAGAACAGATATAATCTT
CTTTTGCTCCCCAAATAATCCCACAGGTCATGCAGCAACAAGGAAGCAAT
TACAGCAGCTTGTAGAGTTTGCAAGGGATAATGGATCAATTATTATTTTT
GACTCTGCTTATGCAGCGTATATTACTGATGACAGTCCTAAATCAATCTT
TGAAATTCCTGGTGCCAAAGAGGTTGCAATTGAAATTTCATCATTCTCTA
AATTTGCTGGGTTCACGGGAGTTCGTCTTGGTTGGACTGTGGTCCCTGAA
GAACTCTTGTTTTCAAGTGGGTTTCCTGTCATAAATGACTTCAATCGCAT
TGTATGCACCTGCTTCAATGGAGCATCCAACATAGCTCAGGCTGGTGGAC
TAGCATGCCTCTCTTCAGAAGGTTTCCAGGCTATATGTTCAGTTATTGAC
TACTACAAGGAGAACACGAAGATATTAGTAAACACTTTTGCCTCTCTTGG
TCTGAAGGCTTATGGTGGTGTAAATGCACCGTATGTTTGGGTGCATTTTC
CGGGTTTAAAATCATGGAATGTATTTGCAGAAATTCTTGAGAAGACTCAT
ATAATAACAGTACCCGGATCTGGCTTTGGTCCTGGTGGTGCAGAGTACAT
CAGAGTCAGTGCTTTTGGGCAAAGAGAGCGCATCATGGAAGCATCATGGA
GGCTGGAGAAACTAATCTCGAATGAAAAAGCCCTTTTTAACTCGGTTGAG
AATAAAGAGTGA
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protein sequence of Tc02v2_p011910.3

>Tc02v2_p011910.3 ID=Tc02v2_p011910.3|Name=Tc02v2_p011910.3|organism=Theobroma cacao|type=polypeptide|length=454bp
MYKLLACCSMASGISLQPKMVQASLGVQKQGNGHCTNVPRNVNLEKLQNN
YLFPEISKRELQHLDKYPSAKVISLGIGDTTEPIPEKISLSMANYAHALS
TAEGYRGYGAEQGNQVLRKAIAETFYKNVLIRDQEVFVSDGSQCDISRLQ
LLLGSKVTIAVQDPSFPAYIDSSVIIGQAGDFQDKTGKYQNIVYMQCGPE
NNFFPDLTTTPRTDIIFFCSPNNPTGHAATRKQLQQLVEFARDNGSIIIF
DSAYAAYITDDSPKSIFEIPGAKEVAIEISSFSKFAGFTGVRLGWTVVPE
ELLFSSGFPVINDFNRIVCTCFNGASNIAQAGGLACLSSEGFQAICSVID
YYKENTKILVNTFASLGLKAYGGVNAPYVWVHFPGLKSWNVFAEILEKTH
IITVPGSGFGPGGAEYIRVSAFGQRERIMEASWRLEKLISNEKALFNSVE
NKE*
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