Tc02v2_t011910.1

Overview
NameTc02v2_t011910.1
Unique NameTc02v2_t011910.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1344
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productaminotransferase ALD1, transcript variant X3
NoteAminotransferase ALD1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608332
GenbankXM_018115687.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g011910Tc02v2_g011910Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p011910.1Tc02v2_p011910.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto102862auto102862Theobroma cacaoexon
exon-auto102863auto102863Theobroma cacaoexon
exon-auto102864auto102864Theobroma cacaoexon
exon-auto102865auto102865Theobroma cacaoexon
exon-auto102866auto102866Theobroma cacaoexon
exon-auto102867auto102867Theobroma cacaoexon
exon-auto102868auto102868Theobroma cacaoexon
exon-auto102869auto102869Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto102870auto102870Theobroma cacaoCDS
CDS-auto102871auto102871Theobroma cacaoCDS
CDS-auto102872auto102872Theobroma cacaoCDS
CDS-auto102873auto102873Theobroma cacaoCDS
CDS-auto102874auto102874Theobroma cacaoCDS
CDS-auto102875auto102875Theobroma cacaoCDS
CDS-auto102876auto102876Theobroma cacaoCDS
CDS-auto102877auto102877Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t011910.1 ID=Tc02v2_t011910.1|Name=Tc02v2_t011910.1|organism=Theobroma cacao|type=mRNA|length=1344bp
ATGGCCTTAGCTCGAAAGACAGCTTCACCTTTTTATGGAAGATTATTTGG
GGTTGGAAAGTGGCAGATGATTACAAAGCATGGAGGGAAAAAAACACTGA
GAACGCGGATTTCAAAGCGGGAGCTCCAGCACCTGGATAAGTACCCAAGT
GCAAAAGTGATTAGCCTTGGGATTGGTGATACCACTGAGCCCATTCCTGA
GAAAATTAGCCTTAGCATGGCTAATTATGCACATGCCCTTTCAACTGCTG
AAGGTTATAGAGGGTATGGAGCTGAGCAAGGGAATCAGGTATTGAGGAAA
GCAATTGCAGAAACATTCTACAAAAATGTACTGATAAGAGACCAGGAAGT
TTTTGTATCAGATGGTTCTCAGTGTGATATTTCCCGCCTTCAGCTGCTTC
TAGGTTCAAAAGTGACAATAGCCGTGCAGGATCCATCTTTTCCGGCTTAT
ATAGATTCAAGTGTTATTATCGGCCAGGCTGGTGATTTTCAAGACAAAAC
TGGGAAGTACCAGAACATTGTATACATGCAGTGTGGACCTGAAAATAATT
TTTTCCCTGATTTAACAACCACTCCAAGAACAGATATAATCTTCTTTTGC
TCCCCAAATAATCCCACAGGTCATGCAGCAACAAGGAAGCAATTACAGCA
GCTTGTAGAGTTTGCAAGGGATAATGGATCAATTATTATTTTTGACTCTG
CTTATGCAGCGTATATTACTGATGACAGTCCTAAATCAATCTTTGAAATT
CCTGGTGCCAAAGAGGTTGCAATTGAAATTTCATCATTCTCTAAATTTGC
TGGGTTCACGGGAGTTCGTCTTGGTTGGACTGTGGTCCCTGAAGAACTCT
TGTTTTCAAGTGGGTTTCCTGTCATAAATGACTTCAATCGCATTGTATGC
ACCTGCTTCAATGGAGCATCCAACATAGCTCAGGCTGGTGGACTAGCATG
CCTCTCTTCAGAAGGTTTCCAGAGGAACAGGACCACTGAATGTCTTTTGG
AAAATTCTCAGGCTATATGTTCAGTTATTGACTACTACAAGGAGAACACG
AAGATATTAGTAAACACTTTTGCCTCTCTTGGTCTGAAGGCTTATGGTGG
TGTAAATGCACCGTATGTTTGGGTGCATTTTCCGGGTTTAAAATCATGGA
ATGTATTTGCAGAAATTCTTGAGAAGACTCATATAATAACAGTACCCGGA
TCTGGCTTTGGTCCTGGTGGTGCAGAGTACATCAGAGTCAGTGCTTTTGG
GCAAAGAGAGCGCATCATGGAAGCATCATGGAGGCTGGAGAAACTAATCT
CGAATGAAAAAGCCCTTTTTAACTCGGTTGAGAATAAAGAGTGA
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protein sequence of Tc02v2_p011910.1

>Tc02v2_p011910.1 ID=Tc02v2_p011910.1|Name=Tc02v2_p011910.1|organism=Theobroma cacao|type=polypeptide|length=448bp
MALARKTASPFYGRLFGVGKWQMITKHGGKKTLRTRISKRELQHLDKYPS
AKVISLGIGDTTEPIPEKISLSMANYAHALSTAEGYRGYGAEQGNQVLRK
AIAETFYKNVLIRDQEVFVSDGSQCDISRLQLLLGSKVTIAVQDPSFPAY
IDSSVIIGQAGDFQDKTGKYQNIVYMQCGPENNFFPDLTTTPRTDIIFFC
SPNNPTGHAATRKQLQQLVEFARDNGSIIIFDSAYAAYITDDSPKSIFEI
PGAKEVAIEISSFSKFAGFTGVRLGWTVVPEELLFSSGFPVINDFNRIVC
TCFNGASNIAQAGGLACLSSEGFQRNRTTECLLENSQAICSVIDYYKENT
KILVNTFASLGLKAYGGVNAPYVWVHFPGLKSWNVFAEILEKTHIITVPG
SGFGPGGAEYIRVSAFGQRERIMEASWRLEKLISNEKALFNSVENKE*
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