Tc02v2_t010130.1

Overview
NameTc02v2_t010130.1
Unique NameTc02v2_t010130.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1296
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
Productarabinosyltransferase RRA2
NoteArabinosyltransferase RRA2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608146
GenbankXM_018116404.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g010130Tc02v2_g010130Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p010130.1Tc02v2_p010130.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto99178auto99178Theobroma cacaoexon
exon-auto99179auto99179Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto99180auto99180Theobroma cacaoCDS
CDS-auto99181auto99181Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t010130.1 ID=Tc02v2_t010130.1|Name=Tc02v2_t010130.1|organism=Theobroma cacao|type=mRNA|length=1296bp
ATGATGGGCGGACGCAGGGAGGGTCCGTTGATGAGAAACGCATCGCAGTC
GGCTGTGAAATCAAGAATATTAATGGCAATAGCCACTGGGATTTCATTGG
GTTGCGTCTTGGCTTTTCTATATCCTCATGGCTTCTTCTCTTCCTCTGCC
CCCACATTCCACTCTCGCCGCACCCAGGTTCCATCTACCAAATGCGAATC
GTCTGAAAAGTTAAATGAGTTGAAAACGGAATATGCAGCAGCATCAATTA
GAAATGCAGAATTGAGACAACAGGTTAAGAAGCTCACTGAAAAGCTTAGG
TTGTCTGAACAAGAGAAAGATCATGCACAAAAACAAGTCGAGGCATTGGG
TGAGCAGCATAAAGCTGGGTCTTTTGGAACTGTTAAAGGTTTGATAACCA
ACCCCACAGTGATTCCAGATGAGTCTGTGAACCCCAGATTGGCAAAATTT
TTAGAAAATGTTGCTGTTCAAAGAGAGCTTATTGTGGCACTTGCAAATTG
GAATGTGAAGGACTCGTTAGAGATTTGGTTCACAAGCATAGAGAGAGTTG
GTATACATAATTATTTAGTTGTTGCTTTGGATGATAAGATTGCCGAATTT
TGTGAATCAAATGATGTTCCAGTTTACAAGAGAGACCCAGACGAGGGAAT
AGATTCTATTGGGAGGGCCGGGACGAACCATGCTGTTTCAGGATTGAAAT
TTCGTATCTTGAGAGAGTTTTTGCAGCTGGGGTACAATGTTCTACTTTCA
GATGTCGATATTGTGTATTTACAGAACCCTTTCAATTATCTTTATCGGGA
TTCAGATGTGGAATCCATGACTGATGGCCATAATAACATGACTGCTTATG
GATTCGATGATGTCTTTGATGAACCTACAATGGGATGGGCTCGATATGCA
CACACAATTCGCCTATGGGTTTATAACTCTGGTTTCTTCTATATCAGACC
GACAATCCCTTCAATTGAGCTCTTGGATCGTGTGGCTAGTCGGCTTGCTC
GTGAGCCGAAGTCTTGGGACCAGGCAGTTTTCAATGAGGAACTCTTTTTT
CCATCACATCCCGGATTCGAGGGGCTTCATGCTGCTCGCAGAACTATGGA
TTTCTATCTCTTCATGAACAGTAAAGTCCTCTTCAAGACTGTGAGGAAAG
ATGCTAGACTGAGCAAGTTCAAGCCGGTGATTATTCACGTGAATTATCAT
CCTAATAAACTCGAACGAATGAAAGCAATTGTGGAATATTATGTTAACGG
TAATCAGGACGCATTGAAAGCTTTTCCTGACGGCTCAGATTGGTAA
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protein sequence of Tc02v2_p010130.1

>Tc02v2_p010130.1 ID=Tc02v2_p010130.1|Name=Tc02v2_p010130.1|organism=Theobroma cacao|type=polypeptide|length=432bp
MMGGRREGPLMRNASQSAVKSRILMAIATGISLGCVLAFLYPHGFFSSSA
PTFHSRRTQVPSTKCESSEKLNELKTEYAAASIRNAELRQQVKKLTEKLR
LSEQEKDHAQKQVEALGEQHKAGSFGTVKGLITNPTVIPDESVNPRLAKF
LENVAVQRELIVALANWNVKDSLEIWFTSIERVGIHNYLVVALDDKIAEF
CESNDVPVYKRDPDEGIDSIGRAGTNHAVSGLKFRILREFLQLGYNVLLS
DVDIVYLQNPFNYLYRDSDVESMTDGHNNMTAYGFDDVFDEPTMGWARYA
HTIRLWVYNSGFFYIRPTIPSIELLDRVASRLAREPKSWDQAVFNEELFF
PSHPGFEGLHAARRTMDFYLFMNSKVLFKTVRKDARLSKFKPVIIHVNYH
PNKLERMKAIVEYYVNGNQDALKAFPDGSDW*
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