Tc02v2_t010060.2

Overview
NameTc02v2_t010060.2
Unique NameTc02v2_t010060.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1119
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Productprobable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5, transcript variant X2
NoteProbable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608138
GenbankXM_018116499.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g010060Tc02v2_g010060Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p010060.2Tc02v2_p010060.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto98955auto98955Theobroma cacaoexon
exon-auto98956auto98956Theobroma cacaoexon
exon-auto98957auto98957Theobroma cacaoexon
exon-auto98958auto98958Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto98959auto98959Theobroma cacaoCDS
CDS-auto98960auto98960Theobroma cacaoCDS
CDS-auto98961auto98961Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t010060.2 ID=Tc02v2_t010060.2|Name=Tc02v2_t010060.2|organism=Theobroma cacao|type=mRNA|length=1119bp
ATGGAAGTTCCTAGTGCAAATCATGAAATGAGGCATCGTTCATTGACCCC
GCTAAGGGTGTTTAGGGGTCTAATATGTTTGCTAGTGCTGTTTTCAACAG
CTTTTATGATGATAGTGTATTGTGGCTTTCTTACCACTGTTATATTCAGG
CTTTTCAGCATACATTACAGTCGGAAAGCAACTTCTTTCTTCTTTAGTGC
TTGGCTGTCTTTATGGCCCTTTTTATTTGAGAAAATAAACAAAACAAAAG
TCATTTTTTCTGGAGATGATGTTCCTCCAAGGGAACGCGTTTTGCTTATT
TGCAACCACAGAACCGAGGTTGACTGGATGTACTTGTGGGACTTTGCATT
GCGGAAAGGTTGCCTGGGATACATAAAGTATATCCTTAAGAGCAGCTTGA
TGAAATTACCTGTATTTGGTTGGGCTTTCCATATTTTAGAGTTCATCCCT
GTGGAAAGGAAGTGGGAGGTTGATGAATCTAACATGCGCAACATGCTTTC
AACATTCAAAGATCCTCAAGATCCTCTCTGGCTTGTTCTCTTTCCCGAAG
GAACAGATTTCACTGAGCAAAAATGCTTAAGAAGTCAAAAATATGCAGCT
GAAAATGGCTTACCTATCCTAAAGAATTTGCTGCTTCCAAAATCAAAGGG
TTTTTTCGCCTGCTTGGAAGATTTGAGGAGCTCTTTGGATGCAGTTTATG
ATGTGACCATTGGATATAAGCATTGCTGCCCATCCTTCTTGGACAATGTC
TTCGGGGTAGACCCTTCTGAAGTTCATATTCACATCAGACGCATTACCCT
GGATGACATTCCAATATCTGAAAGGGAGTTAACCGCTTGGTTAATGGATA
CATTTCAACATAAAGATCAATTGCTTTCTAATTTCAAGTCTGAAGGTTAT
TTCCCTCGGCAAGGACTGGAAGTAAACCTCTCTGCAGTGAAGTGCATTGT
AGACGTTGTGCTGGTGCTTTTCTTGACTAGTGCATTCATATTTTTCACCT
TTTTCTCATCCATTTGGTTTAAGATATTTGTATCTTTATCTTGTGCCTAT
ATGACTTCTGCAACTTATTTAAACACCCGTCCAGTACCAGTCTTCAGCCT
TGTGAAAACTTGTGTCTAA
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protein sequence of Tc02v2_p010060.2

>Tc02v2_p010060.2 ID=Tc02v2_p010060.2|Name=Tc02v2_p010060.2|organism=Theobroma cacao|type=polypeptide|length=373bp
MEVPSANHEMRHRSLTPLRVFRGLICLLVLFSTAFMMIVYCGFLTTVIFR
LFSIHYSRKATSFFFSAWLSLWPFLFEKINKTKVIFSGDDVPPRERVLLI
CNHRTEVDWMYLWDFALRKGCLGYIKYILKSSLMKLPVFGWAFHILEFIP
VERKWEVDESNMRNMLSTFKDPQDPLWLVLFPEGTDFTEQKCLRSQKYAA
ENGLPILKNLLLPKSKGFFACLEDLRSSLDAVYDVTIGYKHCCPSFLDNV
FGVDPSEVHIHIRRITLDDIPISERELTAWLMDTFQHKDQLLSNFKSEGY
FPRQGLEVNLSAVKCIVDVVLVLFLTSAFIFFTFFSSIWFKIFVSLSCAY
MTSATYLNTRPVPVFSLVKTCV*
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