Tc02v2_t009730.1

Overview
NameTc02v2_t009730.1
Unique NameTc02v2_t009730.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length267
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 38 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productcysteine-rich and transmembrane domain-containing protein A
NotePutative Cysteine-rich and transmembrane domain-containing protein B
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608102
GenbankXM_007042604.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g009730Tc02v2_g009730Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p009730.1Tc02v2_p009730.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto98122auto98122Theobroma cacaoexon
exon-auto98123auto98123Theobroma cacaoexon
exon-auto98124auto98124Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto98125auto98125Theobroma cacaoCDS
CDS-auto98126auto98126Theobroma cacaoCDS
CDS-auto98127auto98127Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t009730.1 ID=Tc02v2_t009730.1|Name=Tc02v2_t009730.1|organism=Theobroma cacao|type=mRNA|length=267bp
ATGAGTTATTACAATCAGCAACAGCCTCCTGTTGGTGTTCCTCCTCCTCA
AGGTTATCCACCAGAAGGATATGCCAAGGATGCTTATCCACCACCGGGTT
ATCCCCCTCAAGGATACCCCCAGGGTTATCCTCCTCAGGGATATCCTCCT
CCTTACGCCCCTCAGTATGCTCAGGCTCCTCCTCCTCAGCAAAAGCAAAG
TACTGGTTTCTTAGAAGGCTGTTTGGCCGCCCTTTGCTGTTGCTGCCTGC
TGGATGCCTGCTTCTGA
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protein sequence of Tc02v2_p009730.1

>Tc02v2_p009730.1 ID=Tc02v2_p009730.1|Name=Tc02v2_p009730.1|organism=Theobroma cacao|type=polypeptide|length=89bp
MSYYNQQQPPVGVPPPQGYPPEGYAKDAYPPPGYPPQGYPQGYPPQGYPP
PYAPQYAQAPPPQQKQSTGFLEGCLAALCCCCLLDACF*
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