Tc02v2_t008610.1

Overview
NameTc02v2_t008610.1
Unique NameTc02v2_t008610.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1182
Properties
Property NameValue
NoteCyclin-D3-2
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productcyclin-D3-1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607985
GenbankXM_007042436.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g008610Tc02v2_g008610Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p008610.1Tc02v2_p008610.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto96106auto96106Theobroma cacaoexon
exon-auto96107auto96107Theobroma cacaoexon
exon-auto96108auto96108Theobroma cacaoexon
exon-auto96109auto96109Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto96110auto96110Theobroma cacaoCDS
CDS-auto96111auto96111Theobroma cacaoCDS
CDS-auto96112auto96112Theobroma cacaoCDS
CDS-auto96113auto96113Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t008610.1 ID=Tc02v2_t008610.1|Name=Tc02v2_t008610.1|organism=Theobroma cacao|type=mRNA|length=1182bp
ATGGCTATACAACAACATGAACAGCAATACTCACAACAGCAACAAGAACA
GAACCACCCTTCTTTCTTGCTAGATGCTCTCTACTGTGAAGAAGAGAAAT
GGGAAGAGGAAGAGGATGAAAATGATGTAGGTGAAGTTTTACAGCAAGAG
ATGAGTTCCAGGAGTTGTAATAATGCCAGAAACCCTTCTCTTTTTCCACT
TTTGTTGTTGGAGCAGGATATGTTTTGGGAAGATGGTGAGCTTCTTTCAC
TCTTCTCTAAAGAAAAACAGCAACAGGCGGCTTATCTCAATCCCAACAAT
GTGGAAACTGATGAGCCTCTCGCTGTGGCTCGCCGTGAGGCTGTGGAGTG
GATGCTTAAAGTCAATGCTTACTACGGATTCACCACTCTCACGGCTGTAC
TTTCCATTAACTATCTCGATAGGTTCCTAAGTAGATTTCATTTTCAAAGA
GATAAGCCCTGGATGATCCACCTTGTGGCGGTGACTTGTCTGTCTTTGGC
TGCAAAAGTTGAAGAGACACAAGTACCTCTTCTTCTAGACCTACAGGTTG
AGGAGACAAAATATCTTTTTGAGGCCAAAAATATTCAAAGAATGGAGCTT
TTGGTTCTCTCCACCCTGAAATGGAAGATGCATCCAGTTACCCCGCTTTC
ATTTCTTGATCACATCATAAGGAGGCTTGGATTGAAGACTCATCTCCATT
GGGAGTTTCTCAGGAGATGTGAGCGTCTCCTCCTCTGTGTAATCTCTGAT
TCAAGATCTGTCCATTATCTTCCCTCTGTATTGGCCACTGCAACAATGAT
GCACGTTATAGGCCAAGTTGAGCCTTTCAATCCCATTGACTACCAAAACC
AACTTCTCAGTGTTCTTAAAATAAGCAAGGAAAGAGTAAATGACTGTTGC
AAGCTCATTCTTGATCTATCAACAAGACCCCAAAACAATGCATATAGCAG
TAATCCTCATCCTCACAAGAGGAAGCTGGAGATGGTTCCGAGCAGCCCCA
GCGGTGTGATTGATGCTGCGTTTAGCAGCGATTGCTCAAACGATTCTTGG
GCTGCGGGGTCGTCAGGCTCAGTCTCCTCATCACCAGAGCCACCCTTTAA
GAAGAGCAGAGCCCAAGAACAAGGAATGCGTTTGCCATCACTCAACCGAT
TCTTCGTAGACATCGTTGGCAGCCCTTCTTAA
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protein sequence of Tc02v2_p008610.1

>Tc02v2_p008610.1 ID=Tc02v2_p008610.1|Name=Tc02v2_p008610.1|organism=Theobroma cacao|type=polypeptide|length=394bp
MAIQQHEQQYSQQQQEQNHPSFLLDALYCEEEKWEEEEDENDVGEVLQQE
MSSRSCNNARNPSLFPLLLLEQDMFWEDGELLSLFSKEKQQQAAYLNPNN
VETDEPLAVARREAVEWMLKVNAYYGFTTLTAVLSINYLDRFLSRFHFQR
DKPWMIHLVAVTCLSLAAKVEETQVPLLLDLQVEETKYLFEAKNIQRMEL
LVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCERLLLCVISD
SRSVHYLPSVLATATMMHVIGQVEPFNPIDYQNQLLSVLKISKERVNDCC
KLILDLSTRPQNNAYSSNPHPHKRKLEMVPSSPSGVIDAAFSSDCSNDSW
AAGSSGSVSSSPEPPFKKSRAQEQGMRLPSLNRFFVDIVGSPS*
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