Tc02v2_t008240.1

Overview
NameTc02v2_t008240.1
Unique NameTc02v2_t008240.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1272
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 7 ESTs, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
ProductABSCISIC ACID-INSENSITIVE 5-like protein 7
NoteABSCISIC ACID-INSENSITIVE 5-like protein 6
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607945
GenbankXM_007042378.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g008240Tc02v2_g008240Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p008240.1Tc02v2_p008240.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto95541auto95541Theobroma cacaoexon
exon-auto95542auto95542Theobroma cacaoexon
exon-auto95543auto95543Theobroma cacaoexon
exon-auto95544auto95544Theobroma cacaoexon
exon-auto95545auto95545Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto95546auto95546Theobroma cacaoCDS
CDS-auto95547auto95547Theobroma cacaoCDS
CDS-auto95548auto95548Theobroma cacaoCDS
CDS-auto95549auto95549Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t008240.1 ID=Tc02v2_t008240.1|Name=Tc02v2_t008240.1|organism=Theobroma cacao|type=mRNA|length=1272bp
ATGGGATCTCATCTGAATTACAAGAACTTTGGTGATGCTCCAAGTATGGA
AGGAAACGGGTCAAAGCCACTGGGGAATTTCCCATTGGCTAGGCAGTCAT
CTATATACTCATTGACCTTTGATGAGCTGCAGAACACCTTTGGTGGACTT
GGGAAGGACTTTGGGTCAATGAACATGGATGAACTCTTGAAAAATATATC
AACTGCTGAAGAGACTCAGGCTGTGACAACAGCTTCAGTTGCTGGAGGAG
AAGGAAGTTTTTCTGGTGGGAATTTGCAGAGGCAAGGATCATTGACATTG
CCGAGGACTCTGAGTCAGAAAACGGTTGATGAAGTATGGAGAGACTTGAT
GAAAGAAAATGATGGTGCTAAAGACGGAAGTAATGGCGGTGGTGTTGGTG
GAGGAGCAAGTTTACCACAGAGGCAACAGACTTTGGGAGAGATGACGTTG
GAGGAATTCTTGGTGAGGGCAGGTGTTGTAAGAGAAGATATGCAACAGAT
TGGAATGGCAAACAATAGTGGATTCTTCGGTAACAACACTGGTGTAGCTC
TCGGATTTCAACAGACAAATAGAAACAATGGCTTTTTGAGTAACAATAAC
TCAGTTCTCAATCATCCTCCAAGGTTACCATTGAACATGAGTGGAGTCAA
ATCCTCACAGCCACAGCAGCAGCAGCAGCAACAACAACAACAACAACCAC
AGCAACAGCAGCAGCAGCAGCCACAACCACTCTTTCCCAAGCAACAAACA
GTAGCATTTGCTCCTTCTATGCACTTAATGAACACTGCACAGCTTGCTAA
TCCAGGAGTTAGGGGTTCAATGGTTGGAATTGGTGACCCATCTATGAATA
GTAATCTAGTTCAGTCTACCGGGCTGCAGAGTGGTGGGATGGGAATAGTT
GGTTTAGCATCTCCTCCAAGCCAGATATCTTCAGATATGATTCCAAATAA
CAGCGTAGATGCCACTTCTTTGTCACCAGTTCCTTATGTATTTGGCCGGG
GAAGAAAATGCAGTGCAGCTTTGGAGAAAGTAGTTGAGAGAAGGCAAAGG
AGAATGATTAAGAACAGAGAGTCAGCTGCAAGATCACGAGCTCGCAAGCA
GGCCTATACATTGGAACTTGAAGCTGAAGTTGCAAAACTTAAAGAAATGA
ACCAAGAATTGCAGAAGAAACAGGAAGAAATGATGGAAATGCAGAAAAAT
CAGATGTTAGAGACAATGAGTCGACCGTGTAAAAGACACTGCTTGAGAAG
AACGCTGACTGGTCCTTGGTAG
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protein sequence of Tc02v2_p008240.1

>Tc02v2_p008240.1 ID=Tc02v2_p008240.1|Name=Tc02v2_p008240.1|organism=Theobroma cacao|type=polypeptide|length=424bp
MGSHLNYKNFGDAPSMEGNGSKPLGNFPLARQSSIYSLTFDELQNTFGGL
GKDFGSMNMDELLKNISTAEETQAVTTASVAGGEGSFSGGNLQRQGSLTL
PRTLSQKTVDEVWRDLMKENDGAKDGSNGGGVGGGASLPQRQQTLGEMTL
EEFLVRAGVVREDMQQIGMANNSGFFGNNTGVALGFQQTNRNNGFLSNNN
SVLNHPPRLPLNMSGVKSSQPQQQQQQQQQQQPQQQQQQQPQPLFPKQQT
VAFAPSMHLMNTAQLANPGVRGSMVGIGDPSMNSNLVQSTGLQSGGMGIV
GLASPPSQISSDMIPNNSVDATSLSPVPYVFGRGRKCSAALEKVVERRQR
RMIKNRESAARSRARKQAYTLELEAEVAKLKEMNQELQKKQEEMMEMQKN
QMLETMSRPCKRHCLRRTLTGPW*
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