Tc02v2_t008090.1

Overview
NameTc02v2_t008090.1
Unique NameTc02v2_t008090.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length552
Properties
Property NameValue
NoteCalmodulin-like protein 1
Model evidenceSupporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
CommentThe sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
Productcalmodulin-like protein 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607932
GenbankXM_018115983.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g008090Tc02v2_g008090Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p008090.1Tc02v2_p008090.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto95331auto95331Theobroma cacaoexon
exon-auto95332auto95332Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto95333auto95333Theobroma cacaoCDS
CDS-auto95334auto95334Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t008090.1 ID=Tc02v2_t008090.1|Name=Tc02v2_t008090.1|organism=Theobroma cacao|type=mRNA|length=552bp
ATGTCAAATGTTAGTTTTCTTGAATTCCAGTACAAGCTTTCGAAGAACAA
GTTCTTCCCCAAACCATCTCGCTTATTTTCCAGAGACAGGCAGAACTTGG
GCTTATTACCTGCTTCCCAGCCCGATTTAAATGAGCTAAGGGAAGTTTTT
AATAAGCTAGACTCCAACAAAGATGGGAAGATTTCTCAGGTGGAGTACAA
GGCCATGTTGAGGGCTCTAGGGCAGGGAAACACGACTCGAGATGTGCCCA
AGATTTTCCAGGTGGCAGATATTGATGGAGATGGGTTTATCAATTTTAAA
GACTTCGTGGAAGTGCAAAGGAGGAGCGGTGGGTTAACCATGGACATACA
GAACGCATTCCGCACATTTGATCTCAACTGTGATGGAAAGATAAGTGCAG
AGGAAGTGATGGAAATATTAAGGAGGCTTGGGGAGAGGTGCACCATCCAA
GATTGCCAGAAAATGGTGGCAGCAGTAGACACTGATGGCGACGGTATGGT
TGGCATGGATGAATTCATGACTATGATGACTCGCACTATGAAGCTTGACT
AA
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protein sequence of Tc02v2_p008090.1

>Tc02v2_p008090.1 ID=Tc02v2_p008090.1|Name=Tc02v2_p008090.1|organism=Theobroma cacao|type=polypeptide|length=184bp
MSNVSFLEFQYKLSKNKFFPKPSRLFSRDRQNLGLLPASQPDLNELREVF
NKLDSNKDGKISQVEYKAMLRALGQGNTTRDVPKIFQVADIDGDGFINFK
DFVEVQRRSGGLTMDIQNAFRTFDLNCDGKISAEEVMEILRRLGERCTIQ
DCQKMVAAVDTDGDGMVGMDEFMTMMTRTMKLD*
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