Tc02v2_t006740.1

Overview
NameTc02v2_t006740.1
Unique NameTc02v2_t006740.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1698
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 17 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productaureusidin synthase, transcript variant X1
NotePutative Aureusidin synthase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607763
GenbankXM_007042098.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g006740Tc02v2_g006740Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p006740.1Tc02v2_p006740.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto92653auto92653Theobroma cacaoexon
exon-auto92654auto92654Theobroma cacaoexon
exon-auto92655auto92655Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto92656auto92656Theobroma cacaoCDS
CDS-auto92657auto92657Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t006740.1 ID=Tc02v2_t006740.1|Name=Tc02v2_t006740.1|organism=Theobroma cacao|type=mRNA|length=1698bp
ATGGAGAAGAAGAAATGGATTCTTACAGTTGTGTTAGCCCTCATCGTGGC
AATGCTGCCTTTGACTTTTCGAATCCTGGAATCGCATCAAGTTCAGCGTT
TATATACGGGGGAACTAACAGACATGATACTCGGAAAGCTGGGAGGCCGG
GCTTCCAGTAACCACGACCTTAGCACAGACAAGGCTGTAGCGAGCAAATT
TATCGCCCCGAACTTAACAGCGTGCCACCCATCATATGGTCGTCCAGATC
TTCTTGTTCACTGTTGTCCTCCGGGGTTTGAATCGCCAGTGCCCTTTGTC
GATTTCCAGTTTCCTGATCCTCAATCGCCAAAACGTGTGCGCAGGCCAGT
CCAACTTGTGGACGAGAACTACATCGCCAAATACAACAAGGCTTTGTCGA
TCATGAAGTCCTTGCCATACGATGATCCTCGAAGTTTTGCCCGTCAAGCC
AACTTGCACTGTCTCTTTTGTACTGGAGCCTACGACCAACAAAACTCCAA
TACCCCTCTTAGTATTCACAGAACATGGTTATTCTTTCCCTGGCACCGCA
TGATGATCTACTTCCACGAACGCATCATCGGTAGTCTAATCGGAGATGAC
ACGTTTGCTTTTCCGGTTTGGACTTGGGACATCCCTGAAGGAATGGTGAT
GCCGGATATTTACGCGAACATGAATTTATCATTCTTTCACAAGGTACGTG
ACTTTTCACATTTTCCACCGCGGGTGGCAGATTTGAACTACTTCGAGGAA
ACAAATTTGAGTCCTCAAGAGCAGTTGGATACAAACTTGGCATTTATGTA
TAACCAAATGGTATCTGGTGCAAAGAAGACGGAATTGTTCATGGGATGCA
CATATAAAGCCAATGAAGGATATTGTAATTCACCCGGCACTGTAGAGAGT
GCCCCTCACAACACTTTGCATACATGGGTAGGGAGCAATCTAGAACCTGG
AAGGGAGGATATGGGTAAATTCTACTCAGCAGCAAGAGACCCTATTTTCT
ATGCACATCATTCCAATATAGATCGTCTTTGGGAAGTTTGGAGGGAGATT
CATAAACATGAATTGGATATCAAAGATCCAGATTGGCTAAACTCTTTCTT
TTTCTTTTATGATGAGAACTTGAAGCTGGTAAAGATTAAGGTTCGTGATG
TTCTTGATATCTCCAAACTTGGTTATTCTTACGAGGAGGTCGATCGTCCG
TGGTTGAATAAACGTCCCACGCCTTCAGTTCCGCCAAAGGTAGCCCGTCA
GATATTAAAATCGAAAGAGAATGAGAACCAATTCCGACTGTCCTCTGATT
TCGGGCCCCATGGTCGAGCTCTAGACGCTAGCTTGACAGTAAAGGTTAAC
AGGTCTAAAAATCATTTGACCAAGAGGGAGAAAGGAGAGGAAGAGGTCAT
AGTTGTTCACGGCATTGAAGTGAAAGGGGACGCATATGTTAAGTTTGATG
TGTATGTAAACATGGTTGATCAGACGATAATCTCTCCAAAGTCCAGGGAA
TTCGCGGGGACCTTCGCTCACATTCCTGGGGGTGGGGAGATGATGAAGAG
GAAGATCGATCTCAAACTGGGAGTGTCAGAACTATTGGAAGATTTGGAAG
CAAAGGAAGATGAAAGCATCTGGGTCACATTGTTGCCAAGGACAGCAAGT
TGTAGCAGTGTAACAATTGAAGGAGTACAAATTAAGTATATCAAATAA
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protein sequence of Tc02v2_p006740.1

>Tc02v2_p006740.1 ID=Tc02v2_p006740.1|Name=Tc02v2_p006740.1|organism=Theobroma cacao|type=polypeptide|length=566bp
MEKKKWILTVVLALIVAMLPLTFRILESHQVQRLYTGELTDMILGKLGGR
ASSNHDLSTDKAVASKFIAPNLTACHPSYGRPDLLVHCCPPGFESPVPFV
DFQFPDPQSPKRVRRPVQLVDENYIAKYNKALSIMKSLPYDDPRSFARQA
NLHCLFCTGAYDQQNSNTPLSIHRTWLFFPWHRMMIYFHERIIGSLIGDD
TFAFPVWTWDIPEGMVMPDIYANMNLSFFHKVRDFSHFPPRVADLNYFEE
TNLSPQEQLDTNLAFMYNQMVSGAKKTELFMGCTYKANEGYCNSPGTVES
APHNTLHTWVGSNLEPGREDMGKFYSAARDPIFYAHHSNIDRLWEVWREI
HKHELDIKDPDWLNSFFFFYDENLKLVKIKVRDVLDISKLGYSYEEVDRP
WLNKRPTPSVPPKVARQILKSKENENQFRLSSDFGPHGRALDASLTVKVN
RSKNHLTKREKGEEEVIVVHGIEVKGDAYVKFDVYVNMVDQTIISPKSRE
FAGTFAHIPGGGEMMKRKIDLKLGVSELLEDLEAKEDESIWVTLLPRTAS
CSSVTIEGVQIKYIK*
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