Tc02v2_t006440.1

Overview
NameTc02v2_t006440.1
Unique NameTc02v2_t006440.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1011
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productbifunctional phosphatase IMPL2, chloroplastic
NoteBifunctional phosphatase IMPL2, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607733
GenbankXM_007042041.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g006440Tc02v2_g006440Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p006440.1Tc02v2_p006440.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto92154auto92154Theobroma cacaoexon
exon-auto92155auto92155Theobroma cacaoexon
exon-auto92156auto92156Theobroma cacaoexon
exon-auto92157auto92157Theobroma cacaoexon
exon-auto92158auto92158Theobroma cacaoexon
exon-auto92159auto92159Theobroma cacaoexon
exon-auto92160auto92160Theobroma cacaoexon
exon-auto92161auto92161Theobroma cacaoexon
exon-auto92162auto92162Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto92163auto92163Theobroma cacaoCDS
CDS-auto92164auto92164Theobroma cacaoCDS
CDS-auto92165auto92165Theobroma cacaoCDS
CDS-auto92166auto92166Theobroma cacaoCDS
CDS-auto92167auto92167Theobroma cacaoCDS
CDS-auto92168auto92168Theobroma cacaoCDS
CDS-auto92169auto92169Theobroma cacaoCDS
CDS-auto92170auto92170Theobroma cacaoCDS
CDS-auto92171auto92171Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t006440.1 ID=Tc02v2_t006440.1|Name=Tc02v2_t006440.1|organism=Theobroma cacao|type=mRNA|length=1011bp
ATGTTACTCCAATCGCAATCCCATTTCCTTTCTACTTCCCCCAAAGCCCA
CCCTTTCTCTCACTCCTCCTCCTCCTCTTCTCTCCTTACCAGAAAAAGCT
ACTTCCTCTCGTTTCCTTCCTTCAAAACCCCCCGAATTTGTCTCCAAACA
AAAGCCATGATTTCCAACTCTAAACTCTCTAACCACACCGAGTCTTTATC
ACTAAACGACGCCCAACTCGACCGTTTTGCCGAGGTCGGCAACTACCTTG
CTGATGCCGCCGGCGAAGTGATTCGCAAGTACTTTCGGAAGAAATTCGAG
ATTCTTGATAAAGAAGATTTGAGTCCAGTGACAATTGCAGACCAAGCAGC
TGAGGAATCTATGGTTTCGATTATATTGGAGAATTTTCCGTCCCATGCAA
TTTACGGAGAGGAAAACGGCTGGAGATGTAAAGAGAATTCTGCAGATTAT
GTTTGGGTTTTAGATCCAATAGATGGCACAAAAAGTTTCATTACTGGAAA
ACCAGTCTTTGGTACTCTTATTGCTTTGCTACACAAAAGTAGACCAATTC
TTGGTATAATTGATCAGCCTGTTCTTAGAGAAAGATGGATTGGAATAAGT
GGAAGGAAAAGTACATTGAATGGACAAGAAGTGGCTACACGAACTTGTAC
AGAACTGTCACGAGCATATTTGTACACCACAAGTCCACATCTGTTCAGCG
GAGATGCTGAAGAGGCATTTGCCCGTGTTAAAGATAAGGTGAAGTTGCCA
TTATATGGCTGTGACTGCTATGCTTATGCCCTCTTGGCCTCTGGTTATGT
AGATCTTGTCATTGAGTCTGGTCTTCGGCCATACGATTTCCTTGCACTTG
TACCTGTTATAGAGGGTGCTGGTGGTGTTATAACTGACTGGAAAGGACAG
CAGCTTGACTGGAAAGCTTCTTCAGGTTCACGTGCAACAAGCTTTAATGT
AGTGGCAGCTGGAGACAAACAGATTCACCGTCAAGCTTTAGATGTTCTGC
AGTGGCGGTGA
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protein sequence of Tc02v2_p006440.1

>Tc02v2_p006440.1 ID=Tc02v2_p006440.1|Name=Tc02v2_p006440.1|organism=Theobroma cacao|type=polypeptide|length=337bp
MLLQSQSHFLSTSPKAHPFSHSSSSSSLLTRKSYFLSFPSFKTPRICLQT
KAMISNSKLSNHTESLSLNDAQLDRFAEVGNYLADAAGEVIRKYFRKKFE
ILDKEDLSPVTIADQAAEESMVSIILENFPSHAIYGEENGWRCKENSADY
VWVLDPIDGTKSFITGKPVFGTLIALLHKSRPILGIIDQPVLRERWIGIS
GRKSTLNGQEVATRTCTELSRAYLYTTSPHLFSGDAEEAFARVKDKVKLP
LYGCDCYAYALLASGYVDLVIESGLRPYDFLALVPVIEGAGGVITDWKGQ
QLDWKASSGSRATSFNVVAAGDKQIHRQALDVLQWR*
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