Tc02v2_t005860.1

Overview
NameTc02v2_t005860.1
Unique NameTc02v2_t005860.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1785
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 mRNA, 6 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productamidophosphoribosyltransferase, chloroplastic
NoteAmidophosphoribosyltransferase 2, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607672
GenbankXM_007041939.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g005860Tc02v2_g005860Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p005860.1Tc02v2_p005860.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto90507auto90507Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto90508auto90508Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t005860.1 ID=Tc02v2_t005860.1|Name=Tc02v2_t005860.1|organism=Theobroma cacao|type=mRNA|length=1785bp
ATGGCATCCACCGCCAATCTCTCTTCTTTGTCCTCTTCATCAACTCTCTC
AAAACCCATCTCTAAAAACTCTTCTTTTTCTCTGAACCCGCCTCAAAAAG
CCCCCTTTTCACTCTTTCAAAAAACCCTGCCAAAACCCTCTGCTTTCCCT
CACAAAACTGTTCTCCATACCCAGAAACCTCAGTTTTCCACCTCCTCTAA
AAATCCCATCTCTGACTTCTTCTCAACAAACAAAAGTGACCCAGAAGACG
GTTTTGTCTCTTCTTTTAGTGATGATGATGATAAGCCACGTGAAGAGTGT
GGTGTTGTGGGTATCTTTGGTGACCCTGAAGCGTCACGTCTCTGTTATTT
GGCTCTCCACGCGCTTCAGCATCGTGGACAAGAAGGTGCAGGTATTGTAG
CAGTGAATAACAATGTTCTTCAATCAGTTACTGGGGTTGGTTTGGTATCT
GAAGTGTTTAATGAGTCTAAGCTTGATCAATTGCCTGGTGAAATGGCTAT
TGGACATGTTAGATATTCAACTGCTGGTTCTTCTATGCTAAAAAATGTGC
AGCCTTTTGTTGCTGGCTACAGGTTTGGGTCTGTTGGGGTTGCGCACAAT
GGAAACTTAGTAAACTATAGAGCTTTGAGAGCTATGCTTGAAGATAATGG
TTCAATTTTTAATACTAGTTCTGATACTGAGGTTGTGCTTCATTTGATTG
CTATTTCAAAGGCTAGGCCTTTCTTTTTGAGGATTGTTGATGCTTGTGAG
AAGCTTGAAGGGGCTTACTCCATGGTGTTTGCGACTGAGGATAAGCTTGT
TGCAGTACGTGACCCCTATGGGTTTAGGCCTTTGGTAATGGGGAGAAGGA
GTAATGGTGCTGTGGTGTTTGCCTCTGAGACTTGTGCTCTTGATTTGATT
GAGGCAACATATGAGAGAGAAGTGTATCCTGGTGAAGTTTTGGTGGTGGA
TAAAAAAGATGGGGTCCAATCACTTTGCTTGATGCCCCACCCTGAACCAA
AACAATGTATTTTTGAGCATATCTATTTTGCTCTGCCTAATTCTGTTATT
TTTGGAAAGTCTGTTTATGAGTCACGACATATTTTTGGGGAAATACTTGC
TACTGAGGCTCCTGTTGACTGCGATGTTGTGATTGCAGTGCCAGATTCGG
GGGTGGTGGCTGCACTTGGTTATGCAGCCAAAGCAGGGGTGGCATTTCAG
CAAGGGCTGATCAGGTCTCACTATGTTGGAAGAACTTTTATTGAGCCTTC
CCAGAAGATTAGGGACTTTGGTGTGAAGCTTAAGCTTTCACCGGTTCGTG
GTGTATTGGAAGGAAAGAGGGTCGTGGTCGTGGATGACTCAATTGTGAGA
GGAACCACATCTTCAAAAATTGTTCGGTTGATTAAAGAGGCAGGGGCCAA
GGAGGTTCACATGAGGATTGCAAGCCCACCAATTATTGGGTCTTGTTATT
ATGGAGTGGACACACCCAGCTCTGAGGAGTTGATATCTAATAGGATGAGC
GTGGAGGAGATTAGAGAGTTTATTGGATGTGATTCACTTGCTTTTCTGCC
ATTTGATAGCCTGAAAAAGATGTTGGGTAGTGATTCTCCAAATTTTTGCT
ATGCCTGCTTTTCAGGGAAGTACCCTGTTATGCCAAGGGAGGTTAAAGTG
AAGCGGGTTGGTGATTTCTTGGATGATGGGTTGAATGGACCTATTGATTC
CATTGATGGAGGTTGGGTCAAAGGTCCACGAAATTTTAACATTGAGAAAG
AAATTGATCCCCTGTATCAACAGAGCAAGATTTAG
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protein sequence of Tc02v2_p005860.1

>Tc02v2_p005860.1 ID=Tc02v2_p005860.1|Name=Tc02v2_p005860.1|organism=Theobroma cacao|type=polypeptide|length=595bp
MASTANLSSLSSSSTLSKPISKNSSFSLNPPQKAPFSLFQKTLPKPSAFP
HKTVLHTQKPQFSTSSKNPISDFFSTNKSDPEDGFVSSFSDDDDKPREEC
GVVGIFGDPEASRLCYLALHALQHRGQEGAGIVAVNNNVLQSVTGVGLVS
EVFNESKLDQLPGEMAIGHVRYSTAGSSMLKNVQPFVAGYRFGSVGVAHN
GNLVNYRALRAMLEDNGSIFNTSSDTEVVLHLIAISKARPFFLRIVDACE
KLEGAYSMVFATEDKLVAVRDPYGFRPLVMGRRSNGAVVFASETCALDLI
EATYEREVYPGEVLVVDKKDGVQSLCLMPHPEPKQCIFEHIYFALPNSVI
FGKSVYESRHIFGEILATEAPVDCDVVIAVPDSGVVAALGYAAKAGVAFQ
QGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRGVLEGKRVVVVDDSIVR
GTTSSKIVRLIKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMS
VEEIREFIGCDSLAFLPFDSLKKMLGSDSPNFCYACFSGKYPVMPREVKV
KRVGDFLDDGLNGPIDSIDGGWVKGPRNFNIEKEIDPLYQQSKI*
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