Tc02v2_t005220.2

Overview
NameTc02v2_t005220.2
Unique NameTc02v2_t005220.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1236
Properties
Property NameValue
NotePutative Fatty acid amide hydrolase
Model evidenceSupporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Productputative amidase C869.01, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID108660783
GenbankXM_018115156.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g005220Tc02v2_g005220Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p005220.2Tc02v2_p005220.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto89675auto89675Theobroma cacaoexon
exon-auto89676auto89676Theobroma cacaoexon
exon-auto89677auto89677Theobroma cacaoexon
exon-auto89678auto89678Theobroma cacaoexon
exon-auto89679auto89679Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto89680auto89680Theobroma cacaoCDS
CDS-auto89681auto89681Theobroma cacaoCDS
CDS-auto89682auto89682Theobroma cacaoCDS
CDS-auto89683auto89683Theobroma cacaoCDS
CDS-auto89684auto89684Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t005220.2 ID=Tc02v2_t005220.2|Name=Tc02v2_t005220.2|organism=Theobroma cacao|type=mRNA|length=1236bp
ATGAACACGACCACTGGATCGTACGCCCTGGTGGGTTCTGTCGTTGGTCG
GGACGCGGGCGTAGTAGAAAAGCTGTGGAAAGTTTGGGCTGTCATTTTGG
GGAAGGCGAGTCTATCCGAGTGGTATTCCTTTGGCGCCTTGGGTAAAATT
CCTAACGGCTGGTGTCCTAGAGGCGGACAAGCCCAGAATCCTTATGTTGC
ATCGGGGGATCCGTGTGGATCAAGCAGCGGATCAGCCATTTCCGTGGCTG
CCAACATGGTGAGTGTTTCACTTGGGTCAGAGACTCATGGTTCTATTCTC
TGCCCATCTGACTATAACCCCGTAGTAGGTTTCAAGCCAACCGTTGGACT
CACCAGCCGGGCTGGTGTTATTCCAATCTCATCCAGACAGGACACCATTG
GGCCTATAGCCAGGACAGTGTCTGATGCAGTCTACTTACTGGATGAAATT
GTGGGATTTGACTCAAGAGATAGTGAAGCAACATCAGAAGCTGCTAAATT
CATTCCTGATGGTGGTTATAAACAATTTCTCAACAAAGATGGGATCAGAG
GAAAGAGATTGGGGGTTGTTAGACATCCATTTTTGGACTACTTAAATAGA
TCCATCGTTTCAACTTTTGGAAGTCACCTGGATATACTCAGAGCAAGAGG
GGCAACCATAGTTGATGACCTAGAAATCGCAAATATTGATATAATATCAG
ATCCTGCAAGAAGTGGTGAGCTAATGCTAATGCTTGCAGAGTTCAAGAGT
TCCATAAATGAATACCTAAAAGAGCTTGCAATCTCTCCTGTGAGGTCACT
TGCTGACATTATTGATTTCCACCAGAATAATCCTGAGCTTGAAAAGCTTC
AAGAGTACGGTCAGCACACTTTTATTGAATCAGAGAAGACAAGTGGGATT
GGGGAGAAAGAAACAAAGGCAGTTGAGTATCTGGAAAAACTTTCACAGGA
TGGATTTGAGAAACTGATGACCGACTATAAACTGGACGCATTGGTAGCGC
CTGGTATATCACTTTCCATGACTGTGCTGGCAATTGGAGGCTACCCGGGC
ATTACTGTCCCAGCTGGGTATCACAGCAATGGGATGCCCTCCGGGATTTG
TTTTGGAGGGCTGAAGGGTACAGAACCGAAGCTAATTGAGCTTGCTTTCG
CTTTTGAACAAGCTACGAGGCTGAGAAAACCTCCTTTTTCTGAATCATTT
GATATAACCGGGGACTTTCTCTTTGGTACCGTCTAA
back to top

protein sequence of Tc02v2_p005220.2

>Tc02v2_p005220.2 ID=Tc02v2_p005220.2|Name=Tc02v2_p005220.2|organism=Theobroma cacao|type=polypeptide|length=412bp
MNTTTGSYALVGSVVGRDAGVVEKLWKVWAVILGKASLSEWYSFGALGKI
PNGWCPRGGQAQNPYVASGDPCGSSSGSAISVAANMVSVSLGSETHGSIL
CPSDYNPVVGFKPTVGLTSRAGVIPISSRQDTIGPIARTVSDAVYLLDEI
VGFDSRDSEATSEAAKFIPDGGYKQFLNKDGIRGKRLGVVRHPFLDYLNR
SIVSTFGSHLDILRARGATIVDDLEIANIDIISDPARSGELMLMLAEFKS
SINEYLKELAISPVRSLADIIDFHQNNPELEKLQEYGQHTFIESEKTSGI
GEKETKAVEYLEKLSQDGFEKLMTDYKLDALVAPGISLSMTVLAIGGYPG
ITVPAGYHSNGMPSGICFGGLKGTEPKLIELAFAFEQATRLRKPPFSESF
DITGDFLFGTV*
back to top