Tc02v2_t005220.1

Overview
NameTc02v2_t005220.1
Unique NameTc02v2_t005220.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1185
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Productputative amidase C869.01, transcript variant X2
NotePutative Fatty acid amide hydrolase
Cross References
External references for this mRNA
DatabaseAccession
GeneID108660783
GenbankXM_018115157.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g005220Tc02v2_g005220Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p005220.1Tc02v2_p005220.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto89663auto89663Theobroma cacaoexon
exon-auto89664auto89664Theobroma cacaoexon
exon-auto89665auto89665Theobroma cacaoexon
exon-auto89666auto89666Theobroma cacaoexon
exon-auto89667auto89667Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto89668auto89668Theobroma cacaoCDS
CDS-auto89669auto89669Theobroma cacaoCDS
CDS-auto89670auto89670Theobroma cacaoCDS
CDS-auto89671auto89671Theobroma cacaoCDS
CDS-auto89672auto89672Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t005220.1 ID=Tc02v2_t005220.1|Name=Tc02v2_t005220.1|organism=Theobroma cacao|type=mRNA|length=1185bp
ATGAACACGACCACTGGATCGTACGCCCTGGTGGGTTCTGTCGTTGGTCG
GGACGCGGGCGTAGTAGAAAAGCTGTGGAAAGTTTGGGCTGTCATTTTGG
GGAAGGCGAGTCTATCCGAGTGGTATTCCTTTGGCGCCTTGGGTAAAATT
CCTAACGGCTGGTGTCCTAGAGGCGGACAAGCCCAGAATCCTTATGTTGC
ATCGGGGGATCCGTGTGGATCAAGCAGCGGATCAGCCATTTCCGTGGCTG
CCAACATGGTGAGTGTTTCACTTGGGTCAGAGACTCATGGTTCTATTCTC
TGCCCATCTGACTATAACCCCGTAGTAGGTTTCAAGCCAACCGTTGGACT
CACCAGCCGGGCTGGTGTTATTCCAATCTCATCCAGACAGGACACCATTG
GGCCTATAGCCAGGACAGTGTCTGATGCAGTCTACTTACTGGATGAAATT
GTGGGATTTGACTCAAGAGATAGTGAAGCAACATCAGAAGCTGCTAAATT
CATTCCTGATGGTGGTTATAAACAATTTCTCAACAAAGATGGGATCAGAG
GAAAGAGATTGGGGGTTGTTAGACATCCATTTTTGGACTACTTAAATAGA
TCCATCGTTTCAACTTTTGGAAGTCACCTGGATATACTCAGAGCAAGAGG
GGCAACCATAGTTGATGACCTAGAAATCGCAAATATTGATATAATATCAG
ATCCTGCAAGAAGTGGTGAGCTAATGCTAATGCTTGCAGAGTTCAAGAGT
TCCATAAATGAATACCTAAAAGAGCTTGCAATCTCTCCTGAAAAGCTTCA
AGAGTACGGTCAGCACACTTTTATTGAATCAGAGAAGACAAGTGGGATTG
GGGAGAAAGAAACAAAGGCAGTTGAGTATCTGGAAAAACTTTCACAGGAT
GGATTTGAGAAACTGATGACCGACTATAAACTGGACGCATTGGTAGCGCC
TGGTATATCACTTTCCATGACTGTGCTGGCAATTGGAGGCTACCCGGGCA
TTACTGTCCCAGCTGGGTATCACAGCAATGGGATGCCCTCCGGGATTTGT
TTTGGAGGGCTGAAGGGTACAGAACCGAAGCTAATTGAGCTTGCTTTCGC
TTTTGAACAAGCTACGAGGCTGAGAAAACCTCCTTTTTCTGAATCATTTG
ATATAACCGGGGACTTTCTCTTTGGTACCGTCTAA
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protein sequence of Tc02v2_p005220.1

>Tc02v2_p005220.1 ID=Tc02v2_p005220.1|Name=Tc02v2_p005220.1|organism=Theobroma cacao|type=polypeptide|length=395bp
MNTTTGSYALVGSVVGRDAGVVEKLWKVWAVILGKASLSEWYSFGALGKI
PNGWCPRGGQAQNPYVASGDPCGSSSGSAISVAANMVSVSLGSETHGSIL
CPSDYNPVVGFKPTVGLTSRAGVIPISSRQDTIGPIARTVSDAVYLLDEI
VGFDSRDSEATSEAAKFIPDGGYKQFLNKDGIRGKRLGVVRHPFLDYLNR
SIVSTFGSHLDILRARGATIVDDLEIANIDIISDPARSGELMLMLAEFKS
SINEYLKELAISPEKLQEYGQHTFIESEKTSGIGEKETKAVEYLEKLSQD
GFEKLMTDYKLDALVAPGISLSMTVLAIGGYPGITVPAGYHSNGMPSGIC
FGGLKGTEPKLIELAFAFEQATRLRKPPFSESFDITGDFLFGTV*
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