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Properties
| Property Name | Value |
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| Model evidence | Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns |
| Product | probable ubiquitin-conjugating enzyme E2 23, transcript variant X1 |
| Note | Probable ubiquitin-conjugating enzyme E2 23 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t004530.4 ID=Tc02v2_t004530.4|Name=Tc02v2_t004530.4|organism=Theobroma cacao|type=mRNA|length=3462bp
ATGGGGATGGAGCAACATTTATTAGCTTCTGAGACTAATGAATCCACCAC
AACAAGTTTGCATGGAAGTAACACTTTGAGTCAGGGTGGTTCTTCAACAA
ATGCGTCTGTCAGTGATCAAAATGTAAATTACACTAATGTTGGAGTTAGT
AAACAAAATGAGACTTTCTGTAACTTGCATAGTGTTCCTTATATTTATCG
ACAAGATGTTGTCAGGAGTAATACAAGTGGTGCAATTGGGATTGTGAGTG
AAGTTGCTGGTGACTCAGATTCAGATGGAAGCATAACTGATGATGAAGAT
GACGAAGACGAAGATGATGAGGAGGATGGTGAAGATGAAAGCGGTAATGG
TGATGCAAATAGCAATGCTAATGAGAGTGGTGATGGGAACAAAGGTGGTA
ATTATAAGTGCGGTGATCTTCAAGCCGATCAAATTCGGGTACTCTGGATG
GATGACACTGAGCCAGTTCAAAGTATTAAGAATGTAAGTGTTGTTGATCG
GGGTTTCTTACATGGGGATTATGTTGCTGCTGCTTTAGATTCAACTGGAC
AGGTGGGTGTTGTGGTGGACGTCAATGTCTCTGTTGATCTGTTAGCTCCT
GATGGATCTATTTTAAATGATGTCTCAACTAGAGACTTGCAACGTGTGAG
GGATTTCACTGTGGGCGATTATGTGGTCCTTGGTCCCTGGCTGGGTAGAA
TAGATGATGTTTTAGATAATGTCAACGTGTTGTTTGATGATGGCTCTGTA
TGCAAAGTTACAAGGGCTGAACCATTGCGTCTTAAACCAATTACTAGAAA
TACCCTTGAAGACGATAGTAATTTTCCATACTATCCTGGTCAGCGAGTAA
GAGCAAGCTCTTCATCTGTTTTCAAGAATTCTAGGTGGTTATCTGGCTTA
TGGAAGGCAAATCGGTTGGAAGGTACAGTCACTAAAGTTACAGCTGGAGC
TGTGTTTATTTATTGGATAGCATCTGCTGGCTATGGGCCTGATTCTTCCA
CTGCCCCTGCTGAAGAGCAGAATCCAAAGAATCTAAAACTGTTGTCTTGT
TTTGCGCATGCAAATTGGCAAGTGGGTGATTGGTGTCTTCTTCCAACTTC
ATCGCAATGCATTCCTTTGGACAAGGGTTTGTCCAAACTGCAGCTTAATG
GTTCCATAAAAAATAGGGGAAATTGTGATAAGTTGGATAGTGAATGGGAT
TCCAAAGAGGTTATTCTGTATGAATCAAATGATAATAGTGAATCCATGGA
TCTTGATGCAACACCTACACCTGATGAAAACAATGCAACTATTGAAACTA
AAGACAATGGAGCTATTGGAACTAAAGCCTCACCTGAATCTAGCTCTTGT
AGTAGTTCATTATCAGTTTCAAAGGAGACTGTCCATGAACATTGGCCACA
TCACCGCAAGAAGATCCGGAAAGTTGTGATTAGGAAAGACAAGAAAGCAA
AAAAGAAAGTGGAGAATTTTGAAAGGGCACTTTTGATTGTCAATAGCAGA
ACAAGAGTTGATGTTGCATGGCAGGATGGAACAATCGAACGTGGAGTGGA
TGCAACGACATTGATCCCAATTGAAACTCCCGGTGATCATGAATTTGTTG
CAGAGCAGTATGTGGTGGAGAAGGCCTCTGATGATAGTGATGATGTATAT
GAACCCAGGCGTGTTGGGGTTGTCAAAAGTGTTAATGCAAAGGAGCGGAC
AGCTTGTATAAGGTGGATAAAGCCAGTTGCCAGGGCAGAGGACCCTCGAG
AGTTTGACAAGGAAGAAATTGTAAGTGTGTATGAGCTGGAAGGACATCCA
GATTATGATTATTGTTATGGTGATGTAGTAGTTCGATTATCCCCGGCTTC
TGTTCCCATGCAATCTGCTTCTGGTGAAGGCTTCATTGAGGAACCAAAGC
AGGAAGATGGATCAAAGGAGATAAAACGAGACTTGAAAAAGTGCTCAGGA
AGTAACAAAGTAGAAGGTGAATCACCAAATGAAGCTTCCATGGACTTCAC
GGATCTCTCTTGGGTTGGGAACATAACTGGCCTGAGAAATGGTGATATTG
AGGTTACATGGGCTGATGGGATGGTTTCAACGGTTGGACCTCAAGCAATT
TATGTTGTTGGCCGAGATGATGATGAGTCAATTGCTGCTGGGAGTGAAGT
AAGTGATGATGCTGCTAGTTGGGAAACGGTTAATGATGATGAGATGGATG
CTCTTGAGAATGCTCAAGAGGATCTGGAACCACAAAATGCCAGCAGTATT
ATTTCGGACGTTGAAGAGGGTATGGAGAATAATTCTGGAAGGAATGCAGC
ATTATCACTCCCCTTAGCTGCATTTGATTTTGTCACCAGACTGGCCAGTG
GATTTTTTTCAGGAAGACGAAAAAATATTGATCCAATTGATTTGGATTCC
AAAGGAGAAAATGAACTTCAGCCTGAGGGAAGAGATTTCAGCCATGAGTC
TAGCTCTCAAAAGTCTAATGTTCTTGATAATTTCAGTGGGGAAAGCGTTA
ATGAGAAAGGAGAGGAACATGTTGATGAAAAGGCCCACGAACTTTCACTT
CCATCAGATGTTTTATGCAATGTGAGGATTGAAGACTCAGATTCTAAAAC
AGGTGATGAGGATGATACTTGCAGTTTCAAGCGGTTTGATACAGCTAAAG
ATCCTCTAGATCATTATTTTCTTGGTGCAAATGGACAGAATAGTACTGGA
AGAAAGTGGCTAAAGAAGGTGCAGCAAGATTGGAACATCCTTCAGAACAA
CCTGCCAGATGGAATCTATGTACGGGTATATGAAGATCGGATGGACCTCT
TGAGGGCTGTAATAGTTGGGGCATATGGGACACCTTATCAAGATGGTCTC
TTCTTCTTTGATTTCCACCTTCCTCCTGAGTATCCAGATGTGCCACCGTC
AGCATACTATCATTCTGGCGGTTGGAGAATAAATCCTAATTTGTATGAGG
AAGGTAAGGTGTGCCTTAGCCTTCTAAATACATGGACTGGCAGGGGAAAC
GAAGTTTGGGATTCATTGTCCTCTAGCATCCTTCAAGTCCTAGTTTCACT
GCAGGGGTTAGTGCTAAATTCTAGGCCATATTTCAATGAAGCTGGGTATG
ATAAGCAGGTTGGAACAGCTGAAGGAGAGAAAAATTCATTAGCATACAAT
GAGAATACTTTCTTACTGAACTGCAAGTCAATGATGTATCTCATGCGGAA
GCCCCCAAAGGACTTTGAAGAACTTGTCAGAGACCATTTCAGGAGACGTG
GTTTTTACATCCTTAAAGCATGTGATGCATACATGAAAGGCTACTTAATT
GGCTCTCTAACTAAAGATGCCTCTTATAGTGATGCAAACAATGCAAACTC
CACTTCAGTTGGTTTCAAGCTGATGTTAGGCAAGATTGTACCTAAGCTTT
TATTGGCACTTAATGAAGTTGGAGCTGATTGTCAGGAATTTAAGCATTTC
CAGCAATCATAG back to topprotein sequence of Tc02v2_p004530.4 >Tc02v2_p004530.4 ID=Tc02v2_p004530.4|Name=Tc02v2_p004530.4|organism=Theobroma cacao|type=polypeptide|length=1154bp
MGMEQHLLASETNESTTTSLHGSNTLSQGGSSTNASVSDQNVNYTNVGVS
KQNETFCNLHSVPYIYRQDVVRSNTSGAIGIVSEVAGDSDSDGSITDDED
DEDEDDEEDGEDESGNGDANSNANESGDGNKGGNYKCGDLQADQIRVLWM
DDTEPVQSIKNVSVVDRGFLHGDYVAAALDSTGQVGVVVDVNVSVDLLAP
DGSILNDVSTRDLQRVRDFTVGDYVVLGPWLGRIDDVLDNVNVLFDDGSV
CKVTRAEPLRLKPITRNTLEDDSNFPYYPGQRVRASSSSVFKNSRWLSGL
WKANRLEGTVTKVTAGAVFIYWIASAGYGPDSSTAPAEEQNPKNLKLLSC
FAHANWQVGDWCLLPTSSQCIPLDKGLSKLQLNGSIKNRGNCDKLDSEWD
SKEVILYESNDNSESMDLDATPTPDENNATIETKDNGAIGTKASPESSSC
SSSLSVSKETVHEHWPHHRKKIRKVVIRKDKKAKKKVENFERALLIVNSR
TRVDVAWQDGTIERGVDATTLIPIETPGDHEFVAEQYVVEKASDDSDDVY
EPRRVGVVKSVNAKERTACIRWIKPVARAEDPREFDKEEIVSVYELEGHP
DYDYCYGDVVVRLSPASVPMQSASGEGFIEEPKQEDGSKEIKRDLKKCSG
SNKVEGESPNEASMDFTDLSWVGNITGLRNGDIEVTWADGMVSTVGPQAI
YVVGRDDDESIAAGSEVSDDAASWETVNDDEMDALENAQEDLEPQNASSI
ISDVEEGMENNSGRNAALSLPLAAFDFVTRLASGFFSGRRKNIDPIDLDS
KGENELQPEGRDFSHESSSQKSNVLDNFSGESVNEKGEEHVDEKAHELSL
PSDVLCNVRIEDSDSKTGDEDDTCSFKRFDTAKDPLDHYFLGANGQNSTG
RKWLKKVQQDWNILQNNLPDGIYVRVYEDRMDLLRAVIVGAYGTPYQDGL
FFFDFHLPPEYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGN
EVWDSLSSSILQVLVSLQGLVLNSRPYFNEAGYDKQVGTAEGEKNSLAYN
ENTFLLNCKSMMYLMRKPPKDFEELVRDHFRRRGFYILKACDAYMKGYLI
GSLTKDASYSDANNANSTSVGFKLMLGKIVPKLLLALNEVGADCQEFKHF
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