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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns |
Product | probable ubiquitin-conjugating enzyme E2 23, transcript variant X4 |
Note | Probable ubiquitin-conjugating enzyme E2 23 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t004530.1 ID=Tc02v2_t004530.1|Name=Tc02v2_t004530.1|organism=Theobroma cacao|type=mRNA|length=3390bp ATGGGGATGGAGCAACATTTATTAGCTTCTGAGACTAATGAATCCACCAC AACAAGTTTGCATGGAAGTAACACTTTGAGTCAGGGTGGTTCTTCAACAA ATGCGTCTGTCAGTGATCAAAATGTAAATTACACTAATGTTGGAGTTAGT AAACAAAATGAGACTTTCTGTAACTTGCATAGTGTTCCTTATATTTATCG ACAAGATGTTGTCAGGAGTAATACAAGTGGTGCAATTGGGATTGTGAGTG AAGTTGCTGGTGACTCAGATTCAGATGGAAGCATAACTGATGATGAAGAT GACGAAGACGAAGATGATGAGGAGGATGGTGAAGATGAAAGCGGTAATGG TGATGCAAATAGCAATGCTAATGAGAGTGGTGATGGGAACAAAGGTGGTA ATTATAAGTGCGGTGATCTTCAAGCCGATCAAATTCGGGTACTCTGGATG GATGACACTGAGCCAGTTCAAAGTATTAAGAATGTAAGTGTTGTTGATCG GGGTTTCTTACATGGGGATTATGTTGCTGCTGCTTTAGATTCAACTGGAC AGGTGGGTGTTGTGGTGGACGTCAATGTCTCTGTTGATCTGTTAGCTCCT GATGGATCTATTTTAAATGATGTCTCAACTAGAGACTTGCAACGTGTGAG GGATTTCACTGTGGGCGATTATGTGGTCCTTGGTCCCTGGCTGGGTAGAA TAGATGATGTTTTAGATAATGTCAACGTGTTGTTTGATGATGGCTCTGTA TGCAAAGTTACAAGGGCTGAACCATTGCGTCTTAAACCAATTACTAGAAA TACCCTTGAAGACGATAGTAATTTTCCATACTATCCTGGTCAGCGAGTAA GAGCAAGCTCTTCATCTGTTTTCAAGAATTCTAGGTGGTTATCTGGCTTA TGGAAGGCAAATCGGTTGGAAGGTACAGTCACTAAAGTTACAGCTGGAGC TGTGTTTATTTATTGGATAGCATCTGCTGGCTATGGGCCTGATTCTTCCA CTGCCCCTGCTGAAGAGCAGAATCCAAAGAATCTAAAACTGTTGTCTTGT TTTGCGCATGCAAATTGGCAAGTGGGTGATTGGTGTCTTCTTCCAACTTC ATCGCAATGCATTCCTTTGGACAAGGGTTTGTCCAAACTGCAGCTTAATG GTTCCATAAAAAATAGGGGAAATTGTGATAAGTTGGATAGTGAATGGGAT TCCAAAGAGGTTATTCTGTATGAATCAAATGATAATAGTGAATCCATGGA TCTTGATGCAACACCTACACCTGATGAAAACAATGCAACTATTGAAACTA AAGACAATGGAGCTATTGGAACTAAAGCCTCACCTGAATCTAGCTCTTGT AGTAGTTCATTATCAGTTTCAAAGGAGACTGTCCATGAACATTGGCCACA TCACCGCAAGAAGATCCGGAAAGTTGTGATTAGGAAAGACAAGAAAGCAA AAAAGAAAGTGGAGAATTTTGAAAGGGCACTTTTGATTGTCAATAGCAGA ACAAGAGTTGATGTTGCATGGCAGGATGGAACAATCGAACGTGGAGTGGA TGCAACGACATTGATCCCAATTGAAACTCCCGGTGATCATGAATTTGTTG CAGAGCAGTATGTGGTGGAGAAGGCCTCTGATGATAGTGATGATGTATAT GAACCCAGGCGTGTTGGGGTTGTCAAAAGTGTTAATGCAAAGGAGCGGAC AGCTTGTATAAGGTGGATAAAGCCAGTTGCCAGGGCAGAGGACCCTCGAG AGTTTGACAAGGAAGAAATTGTAAGTGTGTATGAGCTGGAAGGACATCCA GATTATGATTATTGTTATGGTGATGTAGTAGTTCGATTATCCCCGGCTTC TGTTCCCATGCAATCTGCTTCTGGTGAAGGCTTCATTGAGGAACCAAAGC AGGAAGATGGATCAAAGGAGATAAAACGAGACTTGAAAAAGTGCTCAGGA AGTAACAAAGTAGAAGGTGAATCACCAAATGAAGCTTCCATGGACTTCAC GGATCTCTCTTGGGTTGGGAACATAACTGGCCTGAGAAATGGTGATATTG AGGTTACATGGGCTGATGGGATGGTTTCAACGGTTGGACCTCAAGCAATT TATGTTGTTGGCCGAGATGATGATGAGTCAATTGCTGCTGGGAGTGAAGA TCTGGAACCACAAAATGCCAGCAGTATTATTTCGGACGTTGAAGAGGGTA TGGAGAATAATTCTGGAAGGAATGCAGCATTATCACTCCCCTTAGCTGCA TTTGATTTTGTCACCAGACTGGCCAGTGGATTTTTTTCAGGAAGACGAAA AAATATTGATCCAATTGATTTGGATTCCAAAGGAGAAAATGAACTTCAGC CTGAGGGAAGAGATTTCAGCCATGAGTCTAGCTCTCAAAAGTCTAATGTT CTTGATAATTTCAGTGGGGAAAGCGTTAATGAGAAAGGAGAGGAACATGT TGATGAAAAGGCCCACGAACTTTCACTTCCATCAGATGTTTTATGCAATG TGAGGATTGAAGACTCAGATTCTAAAACAGGTGATGAGGATGATACTTGC AGTTTCAAGCGGTTTGATACAGCTAAAGATCCTCTAGATCATTATTTTCT TGGTGCAAATGGACAGAATAGTACTGGAAGAAAGTGGCTAAAGAAGGTGC AGCAAGATTGGAACATCCTTCAGAACAACCTGCCAGATGGAATCTATGTA CGGGTATATGAAGATCGGATGGACCTCTTGAGGGCTGTAATAGTTGGGGC ATATGGGACACCTTATCAAGATGGTCTCTTCTTCTTTGATTTCCACCTTC CTCCTGAGTATCCAGATGTGCCACCGTCAGCATACTATCATTCTGGCGGT TGGAGAATAAATCCTAATTTGTATGAGGAAGGTAAGGTGTGCCTTAGCCT TCTAAATACATGGACTGGCAGGGGAAACGAAGTTTGGGATTCATTGTCCT CTAGCATCCTTCAAGTCCTAGTTTCACTGCAGGGGTTAGTGCTAAATTCT AGGCCATATTTCAATGAAGCTGGGTATGATAAGCAGGTTGGAACAGCTGA AGGAGAGAAAAATTCATTAGCATACAATGAGAATACTTTCTTACTGAACT GCAAGTCAATGATGTATCTCATGCGGAAGCCCCCAAAGGACTTTGAAGAA CTTGTCAGAGACCATTTCAGGAGACGTGGTTTTTACATCCTTAAAGCATG TGATGCATACATGAAAGGCTACTTAATTGGCTCTCTAACTAAAGATGCCT CTTATAGTGATGCAAACAATGCAAACTCCACTTCAGTTGGTTTCAAGCTG ATGTTAGGCAAGATTGTACCTAAGCTTTTATTGGCACTTAATGAAGTTGG AGCTGATTGTCAGGAATTTAAGCATTTCCAGCAATCATAG back to topprotein sequence of Tc02v2_p004530.1 >Tc02v2_p004530.1 ID=Tc02v2_p004530.1|Name=Tc02v2_p004530.1|organism=Theobroma cacao|type=polypeptide|length=1130bp
MGMEQHLLASETNESTTTSLHGSNTLSQGGSSTNASVSDQNVNYTNVGVS KQNETFCNLHSVPYIYRQDVVRSNTSGAIGIVSEVAGDSDSDGSITDDED DEDEDDEEDGEDESGNGDANSNANESGDGNKGGNYKCGDLQADQIRVLWM DDTEPVQSIKNVSVVDRGFLHGDYVAAALDSTGQVGVVVDVNVSVDLLAP DGSILNDVSTRDLQRVRDFTVGDYVVLGPWLGRIDDVLDNVNVLFDDGSV CKVTRAEPLRLKPITRNTLEDDSNFPYYPGQRVRASSSSVFKNSRWLSGL WKANRLEGTVTKVTAGAVFIYWIASAGYGPDSSTAPAEEQNPKNLKLLSC FAHANWQVGDWCLLPTSSQCIPLDKGLSKLQLNGSIKNRGNCDKLDSEWD SKEVILYESNDNSESMDLDATPTPDENNATIETKDNGAIGTKASPESSSC SSSLSVSKETVHEHWPHHRKKIRKVVIRKDKKAKKKVENFERALLIVNSR TRVDVAWQDGTIERGVDATTLIPIETPGDHEFVAEQYVVEKASDDSDDVY EPRRVGVVKSVNAKERTACIRWIKPVARAEDPREFDKEEIVSVYELEGHP DYDYCYGDVVVRLSPASVPMQSASGEGFIEEPKQEDGSKEIKRDLKKCSG SNKVEGESPNEASMDFTDLSWVGNITGLRNGDIEVTWADGMVSTVGPQAI YVVGRDDDESIAAGSEDLEPQNASSIISDVEEGMENNSGRNAALSLPLAA FDFVTRLASGFFSGRRKNIDPIDLDSKGENELQPEGRDFSHESSSQKSNV LDNFSGESVNEKGEEHVDEKAHELSLPSDVLCNVRIEDSDSKTGDEDDTC SFKRFDTAKDPLDHYFLGANGQNSTGRKWLKKVQQDWNILQNNLPDGIYV RVYEDRMDLLRAVIVGAYGTPYQDGLFFFDFHLPPEYPDVPPSAYYHSGG WRINPNLYEEGKVCLSLLNTWTGRGNEVWDSLSSSILQVLVSLQGLVLNS RPYFNEAGYDKQVGTAEGEKNSLAYNENTFLLNCKSMMYLMRKPPKDFEE LVRDHFRRRGFYILKACDAYMKGYLIGSLTKDASYSDANNANSTSVGFKL MLGKIVPKLLLALNEVGADCQEFKHFQQS* back to top
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