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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns |
Product | alanine--tRNA ligase, chloroplastic/mitochondrial, transcript variant X3 |
Note | Alanine--tRNA ligase, chloroplastic/mitochondrial |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t003940.3 ID=Tc02v2_t003940.3|Name=Tc02v2_t003940.3|organism=Theobroma cacao|type=mRNA|length=2577bp ATGGCTAAGATTCTTCATGAATCTATTATTCCCAGACAAGTACCTTGTGC TACTACTGCACAAAGGTGTATACGTACAAATGATGTGGAGAATGTTGGCA GAACGGCAAGGCATCATACATTTTTTGAAATGCTAGGCAATTTCTCCTTT GGAGATTACTTTAAGAAGGAAGCAATCCAATGGTCATGGGAGCTTTCCAC CGTGGAATTTGGGTTGCCACCTGAGAGATTATGGATAAGTGTGTATGAAG ATGATGATGAAGCTTTTGAAATATGGCACAAGGAGGTGGGTGTTCCTGTT GAACGCATAAAAAGAATGGGTGAAGATGACAACTTTTGGATGAGTGGTGC TACTGGTCCCTGTGGCCCATGCTCTGAGATTTATTATGATTTCCATCCTG AGAGGGGATATGCAGATGTGGATCTTGGGGATGATACAAGGTTTATAGAG TTCTACAATCTGGTTTTCATGGAATACAATAAAAAGGATGATGGAACACT TGAGCCCCTAAAACAAAAGAACATCGATACTGGTCTTGGCTTGGAGCGTA TGGCTCGCATCCTTCAAAAGGTTCCAAACAACTATGAAACTGACTTGATT TATCCAATTATAGAAAAGGCATCAGAACTGGCTAATATGTCATATGCCTT GGCAGATGAGCAAACAAAATTGAAATTGAAGGTTGTAGGAGATCATCTAC GTGCAATAGTATATCTCATATCCGATGGTGTTTTGCCATCAAATATTGGT AGAGGTTATGTGGTTCGACGACTTATAAGAAGGGTTGTTCGTGCTGGCAG GTCCCTTGGTATAAAGGGGGAAGTACAAGATAATCTTGAAGGAGCATTTT TACCAGCAATTGCAGAAATAGTAATGGAATTAAGTACCCATATTGATTCA GATGTCAAGATTAAAGCACCCCGTATTCTTGAGGAGCTGAAGAAGGAAGA GCTTCATTTTGTGCAAACTCTAGAGAGAGGAGAAATCTTACTGGAAAAAA TGTTAGCAGATGCATTATCAAATGCTCAGAAAAGTGGGACTATGCCTTGC TTGTCTGGAAAAGACGCATTTCTTCTATATGACACTTTTGGATTTCCAGT GGAGTTAACAACAGAAATTGCTGAAGAACATGGTGTTACTGTAGATATGA ATGGTTTTGATCAAGAGATGGAAAACCAAAGGCGTCTATCTCGGGCTGCT CATAATGTTGTTAAAATTGAGGCTGAAGATGGTGCTAGTCCTACAGAATA TATAAATGAAACTGAATTTGTAGGATATGACAGCCTTTCCGCTCGAGCAG TAGTAGAAAGCCTCATGGTAAATGGAAGTCCAGTGATACAGGTTTCTGAA GGAAATGATGTAGAGGTTTTGCTGAATAGAACACCATTTTATGCTGAATC AGGTGGTCAAATTGGAGATCATGGTTTTCTATATGTTACTGGAGGTGAAA ACCAACAGACAGCTGTTGTCGAGATCAAGGATGTCCAAAAATCCCTGGGT GACATATTTGTTCATAAGGGGACTATCAGAGAGGGGGTTTTGGAAGTTGG CAGAGAAGTTGAAGCAGCTGTGGATGCAAAACTCAGGCAGCGGGCAAAGG TTCATCACACTGCTACCCATTTGTTACAAGCAGCACTTAAGAAATTAATT GGCCAGGAAATATCACAAGCTGGTTCATTGGTGGCTTTTGATCGTCTCAG ATTTGATTTCAACTATGGCCATGCCCTTACTGACACTCAGCTTGAAGATA TTGAGCGACTGATAAATGGGTGGGTTGGGGCTGCAGCATTTCTTGAAACA AAAGTGATGCCTCTTAAGGACGCAAAAGAAGCTGGTGCCATTGCAATGTT TGGGGAAAAATATGGTGAGCAGGTAAGAGTTGTGGAAGTTCCTGGCATAT CAATGGAACTTTGTGGTGGGACCCATGTCAGAAATACTTCTGAAATACGT GTCTTCAAAATAATATCTGAGCAAGGGATTGCATCTGGAGTCAGGCGCAT AGAAGCTGTTGCTGGTGAAGCATTCATCGAATATATCAATGCCAGGGAAT ATCATATGAAGAATCTATGCTCCATGCTCAAGGTGAAAGCTGAAGAAGTG ACAACCAGGGTAGAAAAACTCTTAGAGGAGTTACGAATGTCAAGAAATGA AGTTGCCAATTTGCATACAAAAGCAGCAGTGTATAAAGCATTAACGATTG CAAGCAAGGCATTCGAAGTAGGAACTTCACAAAAGATAAGGGTACTAGTT GAGTCCTTGGATGATGTGGATGCTGATTCACTAAAAGTTGCTGCTGAGCA TTTAATTGATACACTGCAAGATCCTGCAGCAGTAATCTTGGGCTCCTGTC CAGATGAAGGGAAGGTTAGTTTAGTTGCTGCTTTCACTCCAGCAGTGGTT GATCTCGGTATACAGGCTGGGAAGTTTATAGGCCCCATAGCTAAGCTGTG TGGTGGAGGAGGTGGTGGCAGGGCAAATTTTGCTCAAGCTGGTGGGAGGA AGCCTGAGAATCTGCCAAGTGCCCTTGGAAAGGCACGGGAAGAGATTGTC TCTATTCTATCTGAAAAAGCAAGCTGA back to topprotein sequence of Tc02v2_p003940.3 >Tc02v2_p003940.3 ID=Tc02v2_p003940.3|Name=Tc02v2_p003940.3|organism=Theobroma cacao|type=polypeptide|length=859bp
MAKILHESIIPRQVPCATTAQRCIRTNDVENVGRTARHHTFFEMLGNFSF GDYFKKEAIQWSWELSTVEFGLPPERLWISVYEDDDEAFEIWHKEVGVPV ERIKRMGEDDNFWMSGATGPCGPCSEIYYDFHPERGYADVDLGDDTRFIE FYNLVFMEYNKKDDGTLEPLKQKNIDTGLGLERMARILQKVPNNYETDLI YPIIEKASELANMSYALADEQTKLKLKVVGDHLRAIVYLISDGVLPSNIG RGYVVRRLIRRVVRAGRSLGIKGEVQDNLEGAFLPAIAEIVMELSTHIDS DVKIKAPRILEELKKEELHFVQTLERGEILLEKMLADALSNAQKSGTMPC LSGKDAFLLYDTFGFPVELTTEIAEEHGVTVDMNGFDQEMENQRRLSRAA HNVVKIEAEDGASPTEYINETEFVGYDSLSARAVVESLMVNGSPVIQVSE GNDVEVLLNRTPFYAESGGQIGDHGFLYVTGGENQQTAVVEIKDVQKSLG DIFVHKGTIREGVLEVGREVEAAVDAKLRQRAKVHHTATHLLQAALKKLI GQEISQAGSLVAFDRLRFDFNYGHALTDTQLEDIERLINGWVGAAAFLET KVMPLKDAKEAGAIAMFGEKYGEQVRVVEVPGISMELCGGTHVRNTSEIR VFKIISEQGIASGVRRIEAVAGEAFIEYINAREYHMKNLCSMLKVKAEEV TTRVEKLLEELRMSRNEVANLHTKAAVYKALTIASKAFEVGTSQKIRVLV ESLDDVDADSLKVAAEHLIDTLQDPAAVILGSCPDEGKVSLVAAFTPAVV DLGIQAGKFIGPIAKLCGGGGGGRANFAQAGGRKPENLPSALGKAREEIV SILSEKAS* back to top
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