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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns |
Product | alanine--tRNA ligase, chloroplastic/mitochondrial, transcript variant X2 |
Note | Alanine--tRNA ligase, chloroplastic/mitochondrial |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t003940.2 ID=Tc02v2_t003940.2|Name=Tc02v2_t003940.2|organism=Theobroma cacao|type=mRNA|length=2730bp ATGGAAGATCAGCCAAAGGATTCCCTTGTCAGTGGGGATTCTATACGCCG ACGATTTCTTGATTTTTATGCTTCCCGTGGTCACAAGATCATTCCTAGTG CTTCTCTTGTGCCAGATGACCCAACAGTCCTACTGACAATTGCAGGAATG CTTCCCTTCAAGCCTATATTCCTTGGAAAAATTCCCAGACAAGTACCTTG TGCTACTACTGCACAAAGGTGTATACGTACAAATGATGTGGAGAATGTTG GCAGAACGGCAAGGCATCATACATTTTTTGAAATGCTAGGCAATTTCTCC TTTGGAGATTACTTTAAGAAGGAAGCAATCCAATGGTCATGGGAGCTTTC CACCGTGGAATTTGGGTTGCCACCTGAGAGATTATGGATAAGTGTGTATG AAGATGATGATGAAGCTTTTGAAATATGGCACAAGGAGGTGGGTGTTCCT GTTGAACGCATAAAAAGAATGGGTGAAGATGACAACTTTTGGATGAGTGG TGCTACTGGTCCCTGTGGCCCATGCTCTGAGATTTATTATGATTTCCATC CTGAGAGGGGATATGCAGATGTGGATCTTGGGGATGATACAAGGTTTATA GAGTTCTACAATCTGGTTTTCATGGAATACAATAAAAAGGATGATGGAAC ACTTGAGCCCCTAAAACAAAAGAACATCGATACTGGTCTTGGCTTGGAGC GTATGGCTCGCATCCTTCAAAAGGTTCCAAACAACTATGAAACTGACTTG ATTTATCCAATTATAGAAAAGGCATCAGAACTGGCTAATATGTCATATGC CTTGGCAGATGAGCAAACAAAATTGAAATTGAAGGTTGTAGGAGATCATC TACGTGCAATAGTATATCTCATATCCGATGGTGTTTTGCCATCAAATATT GGTAGAGGTTATGTGGTTCGACGACTTATAAGAAGGGTTGTTCGTGCTGG CAGGTCCCTTGGTATAAAGGGGGAAGTACAAGATAATCTTGAAGGAGCAT TTTTACCAGCAATTGCAGAAATAGTAATGGAATTAAGTACCCATATTGAT TCAGATGTCAAGATTAAAGCACCCCGTATTCTTGAGGAGCTGAAGAAGGA AGAGCTTCATTTTGTGCAAACTCTAGAGAGAGGAGAAATCTTACTGGAAA AAATGTTAGCAGATGCATTATCAAATGCTCAGAAAAGTGGGACTATGCCT TGCTTGTCTGGAAAAGACGCATTTCTTCTATATGACACTTTTGGATTTCC AGTGGAGTTAACAACAGAAATTGCTGAAGAACATGGTGTTACTGTAGATA TGAATGGTTTTGATCAAGAGATGGAAAACCAAAGGCGTCTATCTCGGGCT GCTCATAATGTTGTTAAAATTGAGGCTGAAGATGGTGCTAGTCCTACAGA ATATATAAATGAAACTGAATTTGTAGGATATGACAGCCTTTCCGCTCGAG CAGTAGTAGAAAGCCTCATGGTAAATGGAAGTCCAGTGATACAGGTTTCT GAAGGAAATGATGTAGAGGTTTTGCTGAATAGAACACCATTTTATGCTGA ATCAGGTGGTCAAATTGGAGATCATGGTTTTCTATATGTTACTGGAGGTG AAAACCAACAGACAGCTGTTGTCGAGATCAAGGATGTCCAAAAATCCCTG GGTGACATATTTGTTCATAAGGGGACTATCAGAGAGGGGGTTTTGGAAGT TGGCAGAGAAGTTGAAGCAGCTGTGGATGCAAAACTCAGGCAGCGGGCAA AGGTTCATCACACTGCTACCCATTTGTTACAAGCAGCACTTAAGAAATTA ATTGGCCAGGAAATATCACAAGCTGGTTCATTGGTGGCTTTTGATCGTCT CAGATTTGATTTCAACTATGGCCATGCCCTTACTGACACTCAGCTTGAAG ATATTGAGCGACTGATAAATGGGTGGGTTGGGGCTGCAGCATTTCTTGAA ACAAAAGTGATGCCTCTTAAGGACGCAAAAGAAGCTGGTGCCATTGCAAT GTTTGGGGAAAAATATGGTGAGCAGGTAAGAGTTGTGGAAGTTCCTGGCA TATCAATGGAACTTTGTGGTGGGACCCATGTCAGAAATACTTCTGAAATA CGTGTCTTCAAAATAATATCTGAGCAAGGGATTGCATCTGGAGTCAGGCG CATAGAAGCTGTTGCTGGTGAAGCATTCATCGAATATATCAATGCCAGGG AATATCATATGAAGAATCTATGCTCCATGCTCAAGGTGAAAGCTGAAGAA GTGACAACCAGGGTAGAAAAACTCTTAGAGGAGTTACGAATGTCAAGAAA TGAAGTTGCCAATTTGCATACAAAAGCAGCAGTGTATAAAGCATTAACGA TTGCAAGCAAGGCATTCGAAGTAGGAACTTCACAAAAGATAAGGGTACTA GTTGAGTCCTTGGATGATGTGGATGCTGATTCACTAAAAGTTGCTGCTGA GCATTTAATTGATACACTGCAAGATCCTGCAGCAGTAATCTTGGGCTCCT GTCCAGATGAAGGGAAGGTTAGTTTAGTTGCTGCTTTCACTCCAGCAGTG GTTGATCTCGGTATACAGGCTGGGAAGTTTATAGGCCCCATAGCTAAGCT GTGTGGTGGAGGAGGTGGTGGCAGGGCAAATTTTGCTCAAGCTGGTGGGA GGAAGCCTGAGAATCTGCCAAGTGCCCTTGGAAAGGCACGGGAAGAGATT GTCTCTATTCTATCTGAAAAAGCAAGCTGA back to topprotein sequence of Tc02v2_p003940.2 >Tc02v2_p003940.2 ID=Tc02v2_p003940.2|Name=Tc02v2_p003940.2|organism=Theobroma cacao|type=polypeptide|length=910bp
MEDQPKDSLVSGDSIRRRFLDFYASRGHKIIPSASLVPDDPTVLLTIAGM LPFKPIFLGKIPRQVPCATTAQRCIRTNDVENVGRTARHHTFFEMLGNFS FGDYFKKEAIQWSWELSTVEFGLPPERLWISVYEDDDEAFEIWHKEVGVP VERIKRMGEDDNFWMSGATGPCGPCSEIYYDFHPERGYADVDLGDDTRFI EFYNLVFMEYNKKDDGTLEPLKQKNIDTGLGLERMARILQKVPNNYETDL IYPIIEKASELANMSYALADEQTKLKLKVVGDHLRAIVYLISDGVLPSNI GRGYVVRRLIRRVVRAGRSLGIKGEVQDNLEGAFLPAIAEIVMELSTHID SDVKIKAPRILEELKKEELHFVQTLERGEILLEKMLADALSNAQKSGTMP CLSGKDAFLLYDTFGFPVELTTEIAEEHGVTVDMNGFDQEMENQRRLSRA AHNVVKIEAEDGASPTEYINETEFVGYDSLSARAVVESLMVNGSPVIQVS EGNDVEVLLNRTPFYAESGGQIGDHGFLYVTGGENQQTAVVEIKDVQKSL GDIFVHKGTIREGVLEVGREVEAAVDAKLRQRAKVHHTATHLLQAALKKL IGQEISQAGSLVAFDRLRFDFNYGHALTDTQLEDIERLINGWVGAAAFLE TKVMPLKDAKEAGAIAMFGEKYGEQVRVVEVPGISMELCGGTHVRNTSEI RVFKIISEQGIASGVRRIEAVAGEAFIEYINAREYHMKNLCSMLKVKAEE VTTRVEKLLEELRMSRNEVANLHTKAAVYKALTIASKAFEVGTSQKIRVL VESLDDVDADSLKVAAEHLIDTLQDPAAVILGSCPDEGKVSLVAAFTPAV VDLGIQAGKFIGPIAKLCGGGGGGRANFAQAGGRKPENLPSALGKAREEI VSILSEKAS* back to top
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