Tc02v2_t002690.1

Overview
NameTc02v2_t002690.1
Unique NameTc02v2_t002690.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length966
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
ProductL-galactose dehydrogenase
NoteL-galactose dehydrogenase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607308
GenbankXM_018116573.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g002690Tc02v2_g002690Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p002690.1Tc02v2_p002690.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto84410auto84410Theobroma cacaoexon
exon-auto84411auto84411Theobroma cacaoexon
exon-auto84412auto84412Theobroma cacaoexon
exon-auto84413auto84413Theobroma cacaoexon
exon-auto84414auto84414Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto84415auto84415Theobroma cacaoCDS
CDS-auto84416auto84416Theobroma cacaoCDS
CDS-auto84417auto84417Theobroma cacaoCDS
CDS-auto84418auto84418Theobroma cacaoCDS
CDS-auto84419auto84419Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t002690.1 ID=Tc02v2_t002690.1|Name=Tc02v2_t002690.1|organism=Theobroma cacao|type=mRNA|length=966bp
ATGGCAGTTCCCAAACTAGAATTGAGACCCCTCGGAAACACGGGCCTTAA
ACTCAGCAGCGTGGGTTTTGGAGCTTCCCCTCTCGGCAGCGTGTTCGGTC
CCGTCTCCGAGAGCGACGCCGTCGCTTCGGTCCGCGAAGCCTTCCGCCTC
GGCATCAACTTCTTCGACACCTCCCCGTATTATGGAGGGTCGTTGTCTGA
GAAGATGCTTGGTAAGGGACTCAAAGCTCTAGGGGTCCCTAGAAATGAGT
ATATAGTTTCAACAAAATGTGGGAGATATCGTGAAGGTTTTGATTTCAGT
GCTGAGAGAGTAACTAAAAGCATTGATGAAAGCTTGGAAAGGTTGCAACT
TGATTATGTTGATATACTCCAATGCCATGACATCGAATTCGGCTCTCTTG
ATCAGGTTGTGAATGAGACAATTCCAGCTCTTCAGAAACTGAAGGAAGCA
GGGAAAATTCGATTCATTGGCATTACGGGATTGCCGTTGGAAATTTTTAC
TTATGTGCTTGATAGGGTTCCACCAGGCACAGTTGATGTGATTTTGTCAT
ATTGTCATTACAGTATTAATGATTCAACATTGGAGGATTTACTGCCTTAC
TTAAAGAACAAAGGTGTTGGTGTAATCAGTGCATCTCCACTTGCCATGGG
GCTTCTTACTGAGCTTGGTCCACCGGATTGGCATCCAGCTTCACCTGAAC
TCAAGTCTGGCTGCCAAGCTGCTGCAGCGTATTGTAAAGAGAAAGGGAAG
AATATTTCAAAGTTAGCTATGCAGTACAGCTTGTCAAATAAGGATATTTC
GTCGGTGCTGGTTGGCATGAACTCAGTTAAACAGGTTGAAGAGAATGTGG
CTGCTGCTACAGAAGTCGCACTTTTTGGGAAAGATCTGGAAACTCTATCT
GAGATTGAAGCAATCCTGAAACCCGTGAAGAATCAGACATGGCCGAGTGG
AATTCAAAGGAGCTGA
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protein sequence of Tc02v2_p002690.1

>Tc02v2_p002690.1 ID=Tc02v2_p002690.1|Name=Tc02v2_p002690.1|organism=Theobroma cacao|type=polypeptide|length=322bp
MAVPKLELRPLGNTGLKLSSVGFGASPLGSVFGPVSESDAVASVREAFRL
GINFFDTSPYYGGSLSEKMLGKGLKALGVPRNEYIVSTKCGRYREGFDFS
AERVTKSIDESLERLQLDYVDILQCHDIEFGSLDQVVNETIPALQKLKEA
GKIRFIGITGLPLEIFTYVLDRVPPGTVDVILSYCHYSINDSTLEDLLPY
LKNKGVGVISASPLAMGLLTELGPPDWHPASPELKSGCQAAAAYCKEKGK
NISKLAMQYSLSNKDISSVLVGMNSVKQVEENVAAATEVALFGKDLETLS
EIEAILKPVKNQTWPSGIQRS*
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