Tc02v2_t002420.1

Overview
NameTc02v2_t002420.1
Unique NameTc02v2_t002420.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length480
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productpathogenesis-related protein 1A
NotePathogenesis-related protein 1C
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607283
GenbankXM_007041359.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g002420Tc02v2_g002420Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p002420.1Tc02v2_p002420.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto83925auto83925Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto83926auto83926Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t002420.1 ID=Tc02v2_t002420.1|Name=Tc02v2_t002420.1|organism=Theobroma cacao|type=mRNA|length=480bp
ATGGCGTGGTCCAAACTAGCACTTGCATGCCTCATCATCGCATCCTTTGC
GTTGCCTTCCTTGGCCAAAACCTTGAAGCAAGAATTCTTGGATGCTCAAA
ATGAAGCTCGAGCTGAGGTGAACGTCGAGCCAATGGCTTGGGATGCCCAA
GTGGCCGCCTACGCGCAAGAATATGCGAACCAGCGCATTGCGGATTGCGA
CCTTGTTCACTCAGGGGGTCCATACGGAGAGAACATTGCATGGGGTAGCG
ATGACCTTTCGGTCGCGGATGCCGTGAAAATGTGGGTCGACGAGAAGGTC
TATTACGATCACGGCTCGAAGACGTGCGCCTCAGGCCAGGTTTGTGCCCA
TTATACTCAGGTGGTTTGGCGCAACTCGGTTCGTTTAGGGTGCGCCAAGG
TAAGGTGTGACAATGGAGGAACTTTCATTACTTGCAACTATGACCCTCCT
GGCAACTACATTGGGGAGACACCTTATTAA
back to top

protein sequence of Tc02v2_p002420.1

>Tc02v2_p002420.1 ID=Tc02v2_p002420.1|Name=Tc02v2_p002420.1|organism=Theobroma cacao|type=polypeptide|length=160bp
MAWSKLALACLIIASFALPSLAKTLKQEFLDAQNEARAEVNVEPMAWDAQ
VAAYAQEYANQRIADCDLVHSGGPYGENIAWGSDDLSVADAVKMWVDEKV
YYDHGSKTCASGQVCAHYTQVVWRNSVRLGCAKVRCDNGGTFITCNYDPP
GNYIGETPY*
back to top