Tc02v2_t001710.2

Overview
NameTc02v2_t001710.2
Unique NameTc02v2_t001710.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length471
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Productuncharacterized LOC18607162, transcript variant X1
NoteHypothetical protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607162
GenbankXM_018115349.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g001710Tc02v2_g001710Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p001710.2Tc02v2_p001710.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto82559auto82559Theobroma cacaoexon
exon-auto82560auto82560Theobroma cacaoexon
exon-auto82561auto82561Theobroma cacaoexon
exon-auto82562auto82562Theobroma cacaoexon
exon-auto82563auto82563Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto82564auto82564Theobroma cacaoCDS
CDS-auto82565auto82565Theobroma cacaoCDS
CDS-auto82566auto82566Theobroma cacaoCDS
CDS-auto82567auto82567Theobroma cacaoCDS
CDS-auto82568auto82568Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t001710.2 ID=Tc02v2_t001710.2|Name=Tc02v2_t001710.2|organism=Theobroma cacao|type=mRNA|length=471bp
ATGCGATTTGAAAACGTCAAAAAAAGAAAATTAAAAAAAAAAAAGATGGA
GAGTCATGTGAATGAGTATTCTGAAGTGAAGGAGGCGCTCTTGTTGGAGG
TAAAAAGGAGTGAACCGATGAAAGATAGTGGCAGTCTCAGGCGGCGGAGA
CGGCGGGATCCACATTCTGGCACGAGCGGGTCCGAGTTTACTGCTACGAC
CGGCATCAGTGAGGCAAAAAAAAAACCTTCAAACCGGCGTCATGACAGCG
AAAGTGATGTGGAAAGACAATTGCTAGAAGCCATGATGGAAATTGTAGGC
CTTAAGGCGAAAAAAAAAACTTCAAACCGGCGTCATGAGAGCAAAAGTGA
TTTGAAAAGACAATTGCTAGAAGCAAGGATGGAAATTTTAGGCCTTAAGG
TATTATATTTCACTCACTCCAATTATTCATTTTCAAAATTCTTCTTTGCT
TTTTTGTTTCTATTATTATGA
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protein sequence of Tc02v2_p001710.2

>Tc02v2_p001710.2 ID=Tc02v2_p001710.2|Name=Tc02v2_p001710.2|organism=Theobroma cacao|type=polypeptide|length=157bp
MRFENVKKRKLKKKKMESHVNEYSEVKEALLLEVKRSEPMKDSGSLRRRR
RRDPHSGTSGSEFTATTGISEAKKKPSNRRHDSESDVERQLLEAMMEIVG
LKAKKKTSNRRHESKSDLKRQLLEARMEILGLKVLYFTHSNYSFSKFFFA
FLFLLL*
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