Tc02v2_t001700.1

Overview
NameTc02v2_t001700.1
Unique NameTc02v2_t001700.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length687
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productuncharacterized LOC108660924
NoteSerine/threonine-protein kinase PBS1
Cross References
External references for this mRNA
DatabaseAccession
GeneID108660924
GenbankXM_018115348.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g001700Tc02v2_g001700Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p001700.1Tc02v2_p001700.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto82534auto82534Theobroma cacaoexon
exon-auto82535auto82535Theobroma cacaoexon
exon-auto82536auto82536Theobroma cacaoexon
exon-auto82537auto82537Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto82538auto82538Theobroma cacaoCDS
CDS-auto82539auto82539Theobroma cacaoCDS
CDS-auto82540auto82540Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t001700.1 ID=Tc02v2_t001700.1|Name=Tc02v2_t001700.1|organism=Theobroma cacao|type=mRNA|length=687bp
ATGGGTTCCTGCTATAAAGAAATCATTCCGGCTGCTTCACGGGATCAGCT
ACCGATTGCTATTGATGGTGAAGCAGATTTGATCGGCCAAGAAATGGCTA
AGGATGATGAAATAGATTTGGTCCTGCAAGAAATTCAAATGCTGGAGAAT
GCTCCTGATGGTCCACTATTAGCGATGGCTAACAATCAAGAAGGCTGGCG
TTTAAAGGATGTTTTAACTTGGGTTTTCCCTATCACCAGCTTTACCCTGG
AACTCCCTTCAGCGGTTTTCGATCAGCTTTCCTCCAAAGATCACTCTCAT
TACGCGCATATTGTGATGTTAATTTCGTTCATTGCACTGGTGGCTTGCAT
TGCTGAGCTTATTTACAAAGGTAAAAAGGAAAGAGTTACTTGGCAGCCGA
GAGACAGAGTACCTTGGTTTCATTGTCGACAAACCGGCAAGCCTTTTTGT
AGCCTCTGGGAGATCATCGGATTTGCTTGTGCTTTCCTTCAGTGTGTTGT
TACAGCCATCAATTATTCTTTTATATCTCGACATCTTGACGGCCCTATCA
AAACAAGTGCTTTGCCAATCCTCTTTGCTTTCGGTTTGTTGTGCTCTAAA
TATTTCGAGAAGCCAGGCAGGAACAGAGGAGGAAGGCCCAATGGGGGCAG
TGAAGCTGACCTTGTTCAAGTTCTTGTAGAGCCGTAG
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protein sequence of Tc02v2_p001700.1

>Tc02v2_p001700.1 ID=Tc02v2_p001700.1|Name=Tc02v2_p001700.1|organism=Theobroma cacao|type=polypeptide|length=229bp
MGSCYKEIIPAASRDQLPIAIDGEADLIGQEMAKDDEIDLVLQEIQMLEN
APDGPLLAMANNQEGWRLKDVLTWVFPITSFTLELPSAVFDQLSSKDHSH
YAHIVMLISFIALVACIAELIYKGKKERVTWQPRDRVPWFHCRQTGKPFC
SLWEIIGFACAFLQCVVTAINYSFISRHLDGPIKTSALPILFAFGLLCSK
YFEKPGRNRGGRPNGGSEADLVQVLVEP*
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