Tc02v2_t001230.1

Overview
NameTc02v2_t001230.1
Unique NameTc02v2_t001230.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length339
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 7 ESTs, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productcytochrome c
NoteCytochrome c
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607107
GenbankXM_007041102.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g001230Tc02v2_g001230Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p001230.1Tc02v2_p001230.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto81392auto81392Theobroma cacaoexon
exon-auto81393auto81393Theobroma cacaoexon
exon-auto81394auto81394Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto81395auto81395Theobroma cacaoCDS
CDS-auto81396auto81396Theobroma cacaoCDS
CDS-auto81397auto81397Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t001230.1 ID=Tc02v2_t001230.1|Name=Tc02v2_t001230.1|organism=Theobroma cacao|type=mRNA|length=339bp
ATGGCCTCGTTCGATCAAGCACCGCCTGGAAATGCGAAAGCCGGGGAGAA
GATCTTCAAGACGAAGTGCGCCCAGTGTCACACCGTCGAGAAAGGCGCTG
GTCACAAGCAAGGGCCGAATTTGAATGGGCTTTTTGGGAGGCAGTCCGGC
ACAACTTCAGGATACTCCTACTCTGCTGCTAACAAGAACATGGCTGTGAT
TTGGGAAGAGAACACATTATATGACTACTTGCTTAATCCTAAGAAGTACA
TCCCTGGGACAAAGATGGTTTTCCCTGGATTGAAGAAGCCACAGGAACGT
GTCGACCTCATTGCTTATCTGAAGGAATCAACTGCCTGA
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protein sequence of Tc02v2_p001230.1

>Tc02v2_p001230.1 ID=Tc02v2_p001230.1|Name=Tc02v2_p001230.1|organism=Theobroma cacao|type=polypeptide|length=113bp
MASFDQAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSG
TTSGYSYSAANKNMAVIWEENTLYDYLLNPKKYIPGTKMVFPGLKKPQER
VDLIAYLKESTA*
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