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Properties
| Property Name | Value |
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| Model evidence | Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns |
| Product | uncharacterized LOC18607098, transcript variant X9 |
| Note | Uncharacterized protein |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t001130.4 ID=Tc02v2_t001130.4|Name=Tc02v2_t001130.4|organism=Theobroma cacao|type=mRNA|length=4410bp
ATGGAGAGCTGGGAACGTAAGAATGTTAGAAATGAACTAAGACAAGGGAG
GAAGCTAGCAAAGCAGCTCCAAGCAAATCTCAAACGGTCATCTTCCGAAG
AAAATCCTGAGTTAGTCCAAAAGATCGTATCGTCCTTTGAAAAGGCACTT
TCAATGCTTAACTGCAGCACCTCCTCTATGGCAGCCAAGCTGCAGCCCAT
AGCTCACAGCTCGCTTGCTCGTGATGGAAGTCACCAGAGTAAGGACCCTG
ACCATGATATCAAGGAGCAAGACTTCAAAGTTAAAGATTTCTTCATGAAA
AGAGAAGTAACTGAGTCACAGCCTAAAGGACTTGCAACTGAAATGTTTAA
ATTCCCGCCTCCTTTCAGTGGAAGCTTCTCAAGTGCGGGAAATTTGGAAG
CCTTTGACGGTAAGGCAGCCGAATTAAAGCCAACAATAATTGGGACCGAA
TTTGACCATGATTTCATGGAGGAGCATGAGCTCAAAGTCAATGAAACCTT
CAATAAAAGTTGCAGTGTGAAAGATGAGTCAAAGCCTGCAGGACATGCAA
AAGTAATGTTTAAGTCCTTGTCTGACTATAACTTGGAGAAGAAAAAGCAC
ACCGTCGGCGATGCTTCCAAGAAAAGTGCTGCAGGTGAGTCACAACCCAC
AGAAGTTGAGTTTAAAAAGCCCAAATCCTCGCATTCTCTTGGCGAAAGCC
TCCCAAGTAAGGACTCTGACTATAATTTCAAGGAGCAGGAGCTCAAAATC
AATGAGGGCTCCGGCAAAAGGAACGCTAGGCGGAGCTGGACAGTATTGGT
TCACTCTGATATGGTCCTAGGGGAACTTCCTTCTGATGGTTGCAATTGGA
GGAAATATGGACAGAAGGATATTCTTAATGCAAGATTTCCAAGAGAATAC
TACAGGTGCGCACATCGACACACTCAAGGCTGTTTTGCTACAAAGGAAGT
CCAAAGAGAGGATGAAGATCCAATGTTCATCACTGCTACTTACAAAGGAA
TGCACACTTGCACACTAGCCCCAGATTTGATGCCTCCAGGACCACCTGAG
ATACTAGCTCCTTTGGATACTGTACTTGGCGCCGATGGAAATGACAAAAA
GGATTCACAATCTAATCTTCAGTCAAGTGTACACAGTCCTGACAATCAAA
CTTGCATTTCGTCAACCAAGCTAACAAGTGAGCTTCCAAATTTAGGGCTC
AACCTGAATGTGTTTCCTGAGAAATCATTTAAGTCATATCCAACGTGGAA
AAACTTTTATGAAAATGAAGTGAGGAAGAATTGGAAAGTGCTGAACAGGA
AGAAGGATGTGCTACTCTTACTTTCATCTTATCCTATGATTATGATTGAC
AAATCTGACACAGATAAATGGATTATTGATGTATTGGCAACCATGAGACA
TGTGAAATCAACAGAAAAGATTTTATTTGGTGTAGGGGTAGCGAAACATT
GGCCAGGAATGACTACGCTGCAGGAACTTTCTGGACGCTTGCAGAAGTTG
CTGGATGTTCCCTTGATGAATGATATTGAGGGAGTTTTACCGGTAGACTT
GGTTGAGAACCTATATAGGACTACAGAAGCTGATTTAAGACCCCTGTTGG
AAGTGGAACAGAATATAATTAGCGGAAAGACATCAAAATCTAGAGGTTCA
GCAAGTAACAGTGAAGGGGCAGCAATGGAAGCAGAAAAAGAATTGCAGCC
AATGCCTGCAAAATGTAAAACTCTGGTAGAAGATACTGAGTTGCCAGCAA
AAGGAACACTGAATGTACCAGAAGAAATATTTGACTTGGCAATTTATTTA
GCTGTTCGTCAGATCTTAAAATGTATAAACAGGGGATATATCTGGTGTAT
TACTATCAGTGGAAGAGATAAGAAAAGGGTGCTAGGAGCAGTAAAGCAAC
ACCAAGATATAGTTTCCGAGTTTGGATATATCATTGTATTCACTGTGTCA
GAAGATCAAAGTGGGGCAAATGTTCACGGTGTCTTTCAACTGCAGAAGGG
TTTTTGGCTAGGTGGATGCTTTGATTCTGTTGACCTTACACATGAATATT
TTGACAACTTGTGCTCCCCAGGAATCTTATTGCTTACAGAGGATGATTAC
GATAAGAACATGAACTTGGATCAGTCTACACTCCCACTTTTGATAAACCT
TAACAAGTTGGTTGACCATAAACATAGCGATTCAAGGTTCATAATCTTTA
CTTCTAAAATGGCAACAGACATGGAGATAAGAATGGAGGATCATTTGTTG
TCATGGAAATTGTTTTGTAGGATTGTGGGTGAAGGTTTGCTTTCTCCTAG
TATCCAACAGATAGCAGCAAGTTTGGTGAAAGAATACCGTGGCAATCTAC
TCGCCATCATTCTAACGGCCAGGTCCTTGGAGAAAGTTACTGATGATGTC
AACTTGTGGGAACTTGCTGTTAAAAGATTGACCATGCTACCTCCATCTCA
AATAGAAGATATAGACAATGTCCTGATTAATGCATTAACATTCATTTGGG
AACGTATGAACAATAAAACAAGACATTGCATTAAGTTTTTCACGTGGTAT
CCCAAGGGACAGAAAATTAACAGAGTCTCACTAATACAACATTGGATCCA
AGATCGTCTGGTTGATACCCATGATGAAGGTACCAATATTATCCAAAATC
TTGTTGATACATCCCTGCTTAATATTGTGGAGTTAAATGGGGTCCAACTG
CGAAGAGAGATCTATGATGTATTAGTAAACCCACTAATTCTTCAAATGCA
TCCATTTTATCTTTTGCTAGGCAGGGCAAGATTGATTAAACCACCAGAAG
AAGAGGAATGGGATGCCAAAGTGATCAATTTGATGGATAATAAATTATCT
GACCTGCCAGAATCTCCAAGGTCACCCTCACTAATTGCATTGTACCTTCA
GCGTAACTTGGATCTCATGACTATCCCATCTTGTTTCTTCAAGCACATGC
CTTTGCTTCAAATCCTAGACTTATCACACACCAGCATCAAATCTTTGCCA
GAGTCACTTTCTAGTTTGGTTAACCTTCGAGAACTCCTTTTGAAAGGCTG
TGAACTCTTCATACGACTCCCTAGCCATGTTGGAGAACTGAAGAATCTTG
AGAAGCTTGACCTTGATGAAACTCAGATTATTGATCTCCCAGCAGAGATT
GGACAACTTTCCAAATTAAAAATTTTGAGGGTCTCATTCTATGGATATAT
GAACTGTAGCAAAACAAGGTTGCGGCAAGATACAATAATTCCCCCTGGAA
CAATATCAGGTCTCTCTGAATTAACTGAATTAAGCATTGATGTTGATCCG
GATGATGAACGCTGGAATGCAACGGTGAAAGATATTATTGAGGAAGCTTG
CAACTTGAAAACTTTAAGACAGCTTAATTTGTACCTGCCAAACATCGAAA
TATTGTGGAAACGCAGAACCGGTAGCGCATCATTGCTCCATTACCCTTTG
CCACGTTTTAGATTTACTGTCGGTTATCACAAGCGGCAGGTCATATCTCG
AGTACCGGAAGAAGTAGAAGCTCACTTCAATAAAAGCAACAAATGCTTGA
AGTTTGTCAAAGGCAATGATATCCCAGCTGAAATGAAAAAGGTTCTGAAC
CACAGCACAGCTTTTTTCCTGGAAGGTCATGCTACCGCTAGGAGTTTGTC
TGATTTCGGAATTGAGAATACCAGGCTGCTAAAATGTTGCTTATTGACAG
AATGTAATGGAGTCAAAACCATCATTGATTTGTCACAAGGTGGTGGACAC
TCACAAGTTTACACAAGAGGAAAAGGGAAGAGCGAGTCACTGAAGTTTCC
TGAAGAACAAACTGATGCACTTGGAAATCTACAAGACTTGAATATATATT
ACATGAAGAATTTAGAGAGCATTTGGAAGGGGCCTGTTCATAAGCACTGC
CTAGCTAGCCTGAAGTTCCTTGCACTTCATAAATGCCCCAGATTGAGTAC
CATTTTCTCACTAGATTTGGTTGCTAATCTTGACAATTTAGAAGAGCTCA
TTGTTGAACACTGCCCTCAACTGACCAGTCTTGTGAGCCCGACGGGTCAT
GTGTCCAGTAACTCAACACCACAACCAAATTGCTTTTTTCCTAGCTTGAA
AAGAATATCACTGCTTTACGTGCCAAATCTTGTTAGCATTTCTAGTGGTT
TGTGGATTGCTCCAGAACTGGAAAAAGTAGGCTTTTACAATTGCCCAAAG
CTTAAGAGTCTTTCCGCGATGGAAATGTCAAGTGACCATTTGACGAGGAT
CAAAGGAGAAAGTCACTGGTGGGAAGCATTGGAGTGGAAAAACTCAGAGT
GGGGGAACCCGCTGGATTATCTGCAGAGTATCTTTTCCCCACTTATTAAG
GAGAGAGATGTGAAGGCGCAATTGGCAGAAGAAGGAATTATGCACCATGC
TTCAACTTAA back to topprotein sequence of Tc02v2_p001130.4 >Tc02v2_p001130.4 ID=Tc02v2_p001130.4|Name=Tc02v2_p001130.4|organism=Theobroma cacao|type=polypeptide|length=1470bp
MESWERKNVRNELRQGRKLAKQLQANLKRSSSEENPELVQKIVSSFEKAL
SMLNCSTSSMAAKLQPIAHSSLARDGSHQSKDPDHDIKEQDFKVKDFFMK
REVTESQPKGLATEMFKFPPPFSGSFSSAGNLEAFDGKAAELKPTIIGTE
FDHDFMEEHELKVNETFNKSCSVKDESKPAGHAKVMFKSLSDYNLEKKKH
TVGDASKKSAAGESQPTEVEFKKPKSSHSLGESLPSKDSDYNFKEQELKI
NEGSGKRNARRSWTVLVHSDMVLGELPSDGCNWRKYGQKDILNARFPREY
YRCAHRHTQGCFATKEVQREDEDPMFITATYKGMHTCTLAPDLMPPGPPE
ILAPLDTVLGADGNDKKDSQSNLQSSVHSPDNQTCISSTKLTSELPNLGL
NLNVFPEKSFKSYPTWKNFYENEVRKNWKVLNRKKDVLLLLSSYPMIMID
KSDTDKWIIDVLATMRHVKSTEKILFGVGVAKHWPGMTTLQELSGRLQKL
LDVPLMNDIEGVLPVDLVENLYRTTEADLRPLLEVEQNIISGKTSKSRGS
ASNSEGAAMEAEKELQPMPAKCKTLVEDTELPAKGTLNVPEEIFDLAIYL
AVRQILKCINRGYIWCITISGRDKKRVLGAVKQHQDIVSEFGYIIVFTVS
EDQSGANVHGVFQLQKGFWLGGCFDSVDLTHEYFDNLCSPGILLLTEDDY
DKNMNLDQSTLPLLINLNKLVDHKHSDSRFIIFTSKMATDMEIRMEDHLL
SWKLFCRIVGEGLLSPSIQQIAASLVKEYRGNLLAIILTARSLEKVTDDV
NLWELAVKRLTMLPPSQIEDIDNVLINALTFIWERMNNKTRHCIKFFTWY
PKGQKINRVSLIQHWIQDRLVDTHDEGTNIIQNLVDTSLLNIVELNGVQL
RREIYDVLVNPLILQMHPFYLLLGRARLIKPPEEEEWDAKVINLMDNKLS
DLPESPRSPSLIALYLQRNLDLMTIPSCFFKHMPLLQILDLSHTSIKSLP
ESLSSLVNLRELLLKGCELFIRLPSHVGELKNLEKLDLDETQIIDLPAEI
GQLSKLKILRVSFYGYMNCSKTRLRQDTIIPPGTISGLSELTELSIDVDP
DDERWNATVKDIIEEACNLKTLRQLNLYLPNIEILWKRRTGSASLLHYPL
PRFRFTVGYHKRQVISRVPEEVEAHFNKSNKCLKFVKGNDIPAEMKKVLN
HSTAFFLEGHATARSLSDFGIENTRLLKCCLLTECNGVKTIIDLSQGGGH
SQVYTRGKGKSESLKFPEEQTDALGNLQDLNIYYMKNLESIWKGPVHKHC
LASLKFLALHKCPRLSTIFSLDLVANLDNLEELIVEHCPQLTSLVSPTGH
VSSNSTPQPNCFFPSLKRISLLYVPNLVSISSGLWIAPELEKVGFYNCPK
LKSLSAMEMSSDHLTRIKGESHWWEALEWKNSEWGNPLDYLQSIFSPLIK
ERDVKAQLAEEGIMHHAST* back to top
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