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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns |
Product | uncharacterized LOC18607098, transcript variant X2 |
Note | Protein MKS1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t001120.5 ID=Tc02v2_t001120.5|Name=Tc02v2_t001120.5|organism=Theobroma cacao|type=mRNA|length=5463bp ATGGACTCTCAATTTCACGCCGGGGAGCCACCGTCAAAGCGTCAGCTACA AATCCAAGGTCCACGCCCACCCCCTCTAAAGGTCAGCAAAGACTCCCATA AAATCAAAAAACCACCTCACCCACCATCCCACGCCGCTGGTCCCGCAGCA GCAGCAGCAGACCAACGCCGTCCCGAGCCAGTAATCATCTACGCCGTCTC ACCAAAAGTCATCCACGCTGAAGAATCCGATTTCATGTCTATCGTGCAAC GCTACACCGGACTTTCATCCGGTACCTTCTCCGGAGACGGCGACGTCTAC CGGGCGGCGAGGTTGGCAGCGACGGAAAAGGCGAGTTCTAGCTCGAGAGA GAAAATAGGGGACGTGGGGGTCGCGGGTGAAGGTGCGATGGAAGAGGGTT TGATTCGAGCACTGCCAGGGATACTTTCTCCGCCGCCGGAGACGTTGCCA GAGGTGGCGGTGGGATTCTTTTCCCCCGTTCGTACGCCAGGGGGGACGTT CTTATCGCCGGCGGCGAGGTTGGCAGGGACGACAAAGGGGAATCCTAGCT GGAGAGAGAAAATAGGGGACGTGGGGGTCGCGGGTGAAGGTGGGATGAAA GAGGGTTTGATTCGAGCACCGCCAGGGATACTTTCTCCTGCGTCGGAGAC GTTGCCAGCGGTGGCGGCGGGAACATTCTTTTCGCCCGCCGTAGCAGGGG GGACGTTCTTATCGCGGGCGTCGGAGGCGAGAATGATGTCGGCAGACATC ATATATGGTCAATCAAATAGTTGCAGTGTGAAAGATGAGTCAAAGCCTGC GGGACTTGCAAACATAATGTGTAAGTCCTTGTCTGGCTATAACTTGGAGG AGCAAAAGCTCACAGTCAGTGATGCTTCCAAGAAAAGTTCTGCAGGTGAG TTACTACCCACAGAAGTTGAGTTTAAAAAGCCCAAATCCTCGCATTATCT TGGCGAAAGCCTCCCAAGTAAGGACTCTGACTATGATTTCAAAGAGGAGC AAGAGCTCAAAGTCAATGAAACCTTCAACAAAAGTTGCAGTGTGAAAGAT GAGACAAAGCCTGCAGGACTTGCAATCGCAATGTTTAAGTCCTTGTCTGA CTATAACTTGGAGAAGCAAAAGCTCACAGTCAGCGATGCTTCCAAGAAAA GTGCTGCAGGTGAGTTACAACCCACAGAAGTTGAGTTTAAAAAGCCCAAA TCCTCGCATTATCTTGGCGAAAGCCTCCCAAGTAAGGACTCTGACTATGA TTTCAAGGAGGAGCAAGAGCTCAAAGTCAATGAAACCTTCAACAAAAGTT GCAGTGTGAAAGATGAGACAAAGCCTGCAGGACTTGCAATCGCAATGTTT AAGTCCTTGTCTGACTATAACTTGGAGAAGCAAAAGCTCACAGTCAGCGA TGCTTCCAAGAAAAGTGCTGCAGGTGAGTTACAACCCACAGAAGTTGAGT TTAAAAAGCCCAAATCCTCGCATTATCTTGGCGAAAGCCTCCCAAGTAAG GACTCTGACTATGATTTCAAGGAGGAGCAAGAGCTCAAAGTCAATGAAAC CTTCAACAAAAGTTGCAGTGTGAAAGATGAGACAAAGCCTGCAGGACTTG CAATCGCAATGTTTAAGTCCTTGTCTGACTATAACTTGGAGAAGCAAAAG CTCACAGTCAGCGATGCTTCCAAGAAAAGTGCTGCAGGTGAGTCACAACC CACAGAAGTTGAGTTTAAAAAGCCCAAATCCTCGCATTCTCTTGGCGAAA GCCTCCCAAGTAAGGACTCTGACTATAATTTCAAGGAGCAGGAGCTCAAA ATCAATGAGGGCTCCGGCAAAAGGAACGCTAGGCGGAGCTGGACAGTATT GGTTCACTCTGATATGGTCCTAGGGGAACTTCCTTCTGATGGTTGCAATT GGAGGAAATATGGACAGAAGGATATTCTTAATGCAAGATTTCCAAGAGAA TACTACAGGTGCGCACATCGACACACTCAAGGCTGTTTTGCTACAAAGGA AGTCCAAAGAGAGGATGAAGATCCAATGTTCATCACTGCTACTTACAAAG GAATGCACACTTGCACACTAGCCCCAGATTTGATGCCTCCAGGACCACCT GAGATACTAGCTCCTTTGGATACTGTACTTGGCGCCGATGGAAATGACAA AAAGGATTCACAATCTAATCTTCAGTCAAGTGTACACAGTCCTGACAATC AAACTTGCATTTCGTCAACCAAGCTAACAAGTGAGCTTCCAAATTTAGGG CTCAACCTGAATGTGTTTCCTGAGAAATCATTTAAGTCATATCCAACGTG GAAAAACTTTTATGAAAATGAAGTGAGGAAGAATTGGAAAGTGCTGAACA GGAAGAAGGATGTGCTACTCTTACTTTCATCTTATCCTATGATTATGATT GACAAATCTGACACAGATAAATGGATTATTGATGTATTGGCAACCATGAG ACATGTGAAATCAACAGAAAAGATTTTATTTGGTGTAGGGGTAGCGAAAC ATTGGCCAGGAATGACTACGCTGCAGGAACTTTCTGGACGCTTGCAGAAG TTGCTGGATGTTCCCTTGATGAATGATATTGAGGGAGTTTTACCGGTAGA CTTGGTTGAGAACCTATATAGGACTACAGAAGCTGATTTAAGACCCCTGT TGGAAGTGGAACAGAATATAATTAGCGGAAAGACATCAAAATCTAGAGGT TCAGCAAGTAACAGTGAAGGGGCAGCAATGGAAGCAGAAAAAGAATTGCA GCCAATGCCTGCAAAATGTAAAACTCTGGTAGAAGATACTGAGTTGCCAG CAAAAGGAACACTGAATGTACCAGAAGAAATATTTGACTTGGCAATTTAT TTAGCTGTTCGTCAGATCTTAAAATGTATAAACAGGGGATATATCTGGTG TATTACTATCAGTGGAAGAGATAAGAAAAGGGTGCTAGGAGCAGTAAAGC AACACCAAGATATAGTTTCCGAGTTTGGATATATCATTGTATTCACTGTG TCAGAAGATCAAAGTGGGGCAAATGTTCACGGTGTCTTTCAACTGCAGAA GGGTTTTTGGCTAGGTGGATGCTTTGATTCTGTTGACCTTACACATGAAT ATTTTGACAACTTGTGCTCCCCAGGAATCTTATTGCTTACAGAGGATGAT TACGATAAGAACATGAACTTGGATCAGTCTACACTCCCACTTTTGATAAA CCTTAACAAGTTGGTTGACCATAAACATAGCGATTCAAGGTTCATAATCT TTACTTCTAAAATGGCAACAGACATGGAGATAAGAATGGAGGATCATTTG TTGTCATGGAAATTGTTTTGTAGGATTGTGGGTGAAGGTTTGCTTTCTCC TAGTATCCAACAGATAGCAGCAAGTTTGGTGAAAGAATACCGTGGCAATC TACTCGCCATCATTCTAACGGCCAGGTCCTTGGAGAAAGTTACTGATGAT GTCAACTTGTGGGAACTTGCTGTTAAAAGATTGACCATGCTACCTCCATC TCAAATAGAAGATATAGACAATGTCCTGATTAATGCATTAACATTCATTT GGGAACGTATGAACAATAAAACAAGACATTGCATTAAGTTTTTCACGTGG TATCCCAAGGGACAGAAAATTAACAGAGTCTCACTAATACAACATTGGAT CCAAGATCGTCTGGTTGATACCCATGATGAAGGTACCAATATTATCCAAA ATCTTGTTGATACATCCCTGCTTAATATTGTGGAGTTAAATGGGGTCCAA CTGCGAAGAGAGATCTATGATGTATTAGTAAACCCACTAATTCTTCAAAT GCATCCATTTTATCTTTTGCTAGGCAGGGCAAGATTGATTAAACCACCAG AAGAAGAGGAATGGGATGCCAAAGTGATCAATTTGATGGATAATAAATTA TCTGACCTGCCAGAATCTCCAAGGTCACCCTCACTAATTGCATTGTACCT TCAGCGTAACTTGGATCTCATGACTATCCCATCTTGTTTCTTCAAGCACA TGCCTTTGCTTCAAATCCTAGACTTATCACACACCAGCATCAAATCTTTG CCAGAGTCACTTTCTAGTTTGGTTAACCTTCGAGAACTCCTTTTGAAAGG CTGTGAACTCTTCATACGACTCCCTAGCCATGTTGGAGAACTGAAGAATC TTGAGAAGCTTGACCTTGATGAAACTCAGATTATTGATCTCCCAGCAGAG ATTGGACAACTTTCCAAATTAAAAATTTTGAGGGTCTCATTCTATGGATA TATGAACTGTAGCAAAACAAGGTTGCGGCAAGATACAATAATTCCCCCTG GAACAATATCAGGTCTCTCTGAATTAACTGAATTAAGCATTGATGTTGAT CCGGATGATGAACGCTGGAATGCAACGGTGAAAGATATTATTGAGGAAGC TTGCAACTTGAAAACTTTAAGACAGCTTAATTTGTACCTGCCAAACATCG AAATATTGTGGAAACGCAGAACCGGTAGCGCATCATTGCTCCATTACCCT TTGCCACGTTTTAGATTTACTGTCGGTTATCACAAGCGGCAGGTCATATC TCGAGTACCGGAAGAAGTAGAAGCTCACTTCAATAAAAGCAACAAATGCT TGAAGTTTGTCAAAGGCAATGATATCCCAGCTGAAATGAAAAAGGTTCTG AACCACAGCACAGCTTTTTTCCTGGAAGGTCATGCTACCGCTAGGAGTTT GTCTGATTTCGGAATTGAGAATACCAGGCTGCTAAAATGTTGCTTATTGA CAGAATGTAATGGAGTCAAAACCATCATTGATTTGTCACAAGGTGGTGGA CACTCACAAGTTTACACAAGAGGAAAAGGGAAGAGCGAGTCACTGAAGTT TCCTGAAGAACAAACTGATGCACTTGGAAATCTACAAGACTTGAATATAT ATTACATGAAGAATTTAGAGAGCATTTGGAAGGGGCCTGTTCATAAGCAC TGCCTAGCTAGCCTGAAGTTCCTTGCACTTCATAAATGCCCCAGATTGAG TACCATTTTCTCACTAGATTTGGTTGCTAATCTTGACAATTTAGAAGAGC TCATTGTTGAACACTGCCCTCAACTGACCAGTCTTGTGAGCCCGACGGGT CATGTGTCCAGTAACTCAACACCACAACCAAATTGCTTTTTTCCTAGCTT GAAAAGAATATCACTGCTTTACGTGCCAAATCTTGTTAGCATTTCTAGTG GTTTGTGGATTGCTCCAGAACTGGAAAAAGTAGGCTTTTACAATTGCCCA AAGCTTAAGAGTCTTTCCGCGATGGAAATGTCAAGTGACCATTTGACGAG GATCAAAGGAGAAAGTCACTGGTGGGAAGCATTGGAGTGGAAAAACTCAG AGTGGGGGAACCCGCTGGATTATCTGCAGAGTATCTTTTCCCCACTTATT AAGGAGAGAGATGTGAAGGCGCAATTGGCAGAAGAAGGAATTATGCACCA TGCTTCAACTTAA back to topprotein sequence of Tc02v2_p001120.5 >Tc02v2_p001120.5 ID=Tc02v2_p001120.5|Name=Tc02v2_p001120.5|organism=Theobroma cacao|type=polypeptide|length=1821bp
MDSQFHAGEPPSKRQLQIQGPRPPPLKVSKDSHKIKKPPHPPSHAAGPAA AAADQRRPEPVIIYAVSPKVIHAEESDFMSIVQRYTGLSSGTFSGDGDVY RAARLAATEKASSSSREKIGDVGVAGEGAMEEGLIRALPGILSPPPETLP EVAVGFFSPVRTPGGTFLSPAARLAGTTKGNPSWREKIGDVGVAGEGGMK EGLIRAPPGILSPASETLPAVAAGTFFSPAVAGGTFLSRASEARMMSADI IYGQSNSCSVKDESKPAGLANIMCKSLSGYNLEEQKLTVSDASKKSSAGE LLPTEVEFKKPKSSHYLGESLPSKDSDYDFKEEQELKVNETFNKSCSVKD ETKPAGLAIAMFKSLSDYNLEKQKLTVSDASKKSAAGELQPTEVEFKKPK SSHYLGESLPSKDSDYDFKEEQELKVNETFNKSCSVKDETKPAGLAIAMF KSLSDYNLEKQKLTVSDASKKSAAGELQPTEVEFKKPKSSHYLGESLPSK DSDYDFKEEQELKVNETFNKSCSVKDETKPAGLAIAMFKSLSDYNLEKQK LTVSDASKKSAAGESQPTEVEFKKPKSSHSLGESLPSKDSDYNFKEQELK INEGSGKRNARRSWTVLVHSDMVLGELPSDGCNWRKYGQKDILNARFPRE YYRCAHRHTQGCFATKEVQREDEDPMFITATYKGMHTCTLAPDLMPPGPP EILAPLDTVLGADGNDKKDSQSNLQSSVHSPDNQTCISSTKLTSELPNLG LNLNVFPEKSFKSYPTWKNFYENEVRKNWKVLNRKKDVLLLLSSYPMIMI DKSDTDKWIIDVLATMRHVKSTEKILFGVGVAKHWPGMTTLQELSGRLQK LLDVPLMNDIEGVLPVDLVENLYRTTEADLRPLLEVEQNIISGKTSKSRG SASNSEGAAMEAEKELQPMPAKCKTLVEDTELPAKGTLNVPEEIFDLAIY LAVRQILKCINRGYIWCITISGRDKKRVLGAVKQHQDIVSEFGYIIVFTV SEDQSGANVHGVFQLQKGFWLGGCFDSVDLTHEYFDNLCSPGILLLTEDD YDKNMNLDQSTLPLLINLNKLVDHKHSDSRFIIFTSKMATDMEIRMEDHL LSWKLFCRIVGEGLLSPSIQQIAASLVKEYRGNLLAIILTARSLEKVTDD VNLWELAVKRLTMLPPSQIEDIDNVLINALTFIWERMNNKTRHCIKFFTW YPKGQKINRVSLIQHWIQDRLVDTHDEGTNIIQNLVDTSLLNIVELNGVQ LRREIYDVLVNPLILQMHPFYLLLGRARLIKPPEEEEWDAKVINLMDNKL SDLPESPRSPSLIALYLQRNLDLMTIPSCFFKHMPLLQILDLSHTSIKSL PESLSSLVNLRELLLKGCELFIRLPSHVGELKNLEKLDLDETQIIDLPAE IGQLSKLKILRVSFYGYMNCSKTRLRQDTIIPPGTISGLSELTELSIDVD PDDERWNATVKDIIEEACNLKTLRQLNLYLPNIEILWKRRTGSASLLHYP LPRFRFTVGYHKRQVISRVPEEVEAHFNKSNKCLKFVKGNDIPAEMKKVL NHSTAFFLEGHATARSLSDFGIENTRLLKCCLLTECNGVKTIIDLSQGGG HSQVYTRGKGKSESLKFPEEQTDALGNLQDLNIYYMKNLESIWKGPVHKH CLASLKFLALHKCPRLSTIFSLDLVANLDNLEELIVEHCPQLTSLVSPTG HVSSNSTPQPNCFFPSLKRISLLYVPNLVSISSGLWIAPELEKVGFYNCP KLKSLSAMEMSSDHLTRIKGESHWWEALEWKNSEWGNPLDYLQSIFSPLI KERDVKAQLAEEGIMHHAST* back to top
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